Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq280 159 7e-37 >seq280 Length=59840 Score = 159 bits (176), Expect = 7e-37 Identities = 225/313 (72%), Gaps = 11/313 (4%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||| |||||||| ||| |||||| ||| | |||||| |||| ||| | || |||| Sbjct 55089 AGGAGGGTGAAAAAGAACCTGAAACCGTATGTCTACAATCGGTGGGAACACTATGGTTCG 55148 Query 71 ------GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG 124 ||||| |||| ||||||| || ||| | | ||||| | | ||| | || ||| Sbjct 55149 TCCAGTGTGACCGCGTACCTTTTGTATCATGGGTCGGCGAGTCAATT-TCAGCGGCAAGG 55207 Query 125 TTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||||| || ||| ||||||||| ||||||||| | || |||||| ||| | Sbjct 55208 TTAAGCCATT-AGGTG---TAGCCGAAGCGAAAGCGAGTCCGAATAGGGCGCGAAGTCGT 55263 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 ||| | ||| |||| ||| |||||||||| | ||||| ||||| ||||| | Sbjct 55264 TGGGATTGGACCCGAAGCCTGTCGATCTACCCATGGGCAGGGTGAAGCGAGGGTAAAACC 55323 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 | |||||| ||||||| | | |||||||| | || |||||||| | ||||||||||| Sbjct 55324 TCGTGGAGGCCCGAACCCATTGATGTTGAAAAATCTTGGGATGACTTGTGGGTAGGGGTG 55383 Query 305 AAAGGCCAATCAA 317 ||||||||||||| Sbjct 55384 AAAGGCCAATCAA 55396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972789075456