Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1108 118 1e-24 seq866 118 1e-24 seq396 118 1e-24 seq253 118 1e-24 seq219 118 1e-24 seq182 118 1e-24 seq763 113 5e-23 seq390 113 5e-23 seq387 113 5e-23 seq494 102 1e-19 seq414 98.7 1e-18 seq955 96.9 4e-18 seq787 87.8 2e-15 >seq1108 Length=20975 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 17605 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 17663 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 17664 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 17702 >seq866 Length=905157 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 788889 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 788831 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 788830 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 788792 >seq396 Length=32609 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 13939 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 13997 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 13998 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 14036 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 28325 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 28383 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 28384 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 28422 >seq253 Length=48319 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 10421 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 10479 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 10480 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 10518 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 28759 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 28817 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 28818 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 28856 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 46286 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 46344 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 46345 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 46383 >seq219 Length=546749 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 404614 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 404556 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 404555 AAATGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 404517 >seq182 Length=1481751 Score = 118 bits (130), Expect = 1e-24 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 12866 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 12924 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||||||||||||||||||||||| ||||| Sbjct 12925 AAACGCCCGCTTTGAACACTCTAATTTTCTCACAGTAAA 12963 >seq763 Length=1302795 Score = 113 bits (124), Expect = 5e-23 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 729724 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 729782 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||||||||||||||||||| |||| ||||| Sbjct 729783 AAACGCCCGCTTTGAACACTCTAATTTGCTCACAGTAAA 729821 >seq390 Length=27140 Score = 113 bits (124), Expect = 5e-23 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 19954 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 20012 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||||||||||||||||| |||||| ||||| Sbjct 20013 AAACGCCCGCTTTGAACACTCTAATGTTCTCACAGTAAA 20051 >seq387 Length=4017768 Score = 113 bits (124), Expect = 5e-23 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 3209 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 3267 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||||||||||||||||| |||||| ||||| Sbjct 3268 AAACGCCCGCTTTGAACACTCTAATGTTCTCACAGTAAA 3306 >seq494 Length=72403 Score = 102 bits (112), Expect = 1e-19 Identities = 85/99 (86%), Gaps = 4/99 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGC 68 |||||||||||||||| | || ||||||||||||||||| |||||||||||||| ||| Sbjct 184 AAACCAACAAAATAGGAAA-CAGGTCCTATTCTATTATTC-ATGCTAATGTATTCATGGC 127 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| |||| ||||||||||||||||||| ||||| Sbjct 126 AAACGCCCGCTT-GAACACTCTAATTTTCTCACAGTAAA 89 >seq414 Length=1073906 Score = 98.7 bits (108), Expect = 1e-18 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGC 68 |||||||| ||| ||||| || ||||| || |||||| ||||||||||| |||| ||| Sbjct 191881 AAACCAACGAAA-AGGGAAACAAGTCCTGTTTTATTATCCCATGCTAATGCATTCATGGC 191939 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 ||||| ||||||||||||||||| ||||||| |||||| Sbjct 191940 AAAAGCCCGCTTTGAACACTCTAATATTCTCAAATTAAAAG 191980 >seq955 Length=274821 Score = 96.9 bits (106), Expect = 4e-18 Identities = 78/92 (85%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||||||| | | | ||||||||||| ||||| |||||||||||||| ||| Sbjct 76245 AAACCAACAAAATAGGAAAG-AGGTCCTATTCTAATATTCTATGCTAATGTATTCATGGC 76303 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 ||||| | ||| |||||| ||||||||||| Sbjct 76304 AAAAGCCAGATTTTAACACTATAATTTTCTCA 76335 >seq787 Length=264912 Score = 87.8 bits (96), Expect = 2e-15 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT-CGGGC 68 ||||||||||| |||| | || ||||||||| | ||||||||||||||||||| | ||| Sbjct 149355 AAACCAACAAAGTAGGAAA-CAAGTCCTATTCAAATATTCCATGCTAATGTATTCCTGGC 149413 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 ||||| |||||||| ||| ||| ||| ||| Sbjct 149414 AAAAGCCCGCTTTGAAAACTATAACTTTATCA 149445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595193524782