Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq195 125 2e-26 seq158 80.6 7e-13 >seq195 Length=301014 Score = 125 bits (138), Expect = 2e-26 Identities = 195/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 ||| | |||| ||||||||||| ||||||| ||| |||| |||||||||||||||| Sbjct 25369 GTGGATCTTGCGGATGAAGTACTTCAGCATCGCTTCGGTGACGGTGAAGTCGGCGATCAC 25428 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 ||||| ||| || || ||||| | |||||||| || || || | ||| |||| Sbjct 25429 CCCGTCACGCATAGGGCGGATGGCGACGATATTGCCCGGGGTCTTCCCCAACATCTGCTT 25488 Query 248 GGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTC--CG-AATGGCCAC 304 |||||||| ||| || || | ||| ||||| ||| | || || || || || Sbjct 25489 GGCCTCGGCGCCCACAGCGAGGAC---CTTCTGGCCACCGTTTTTCTTCGCTATAGCAAC 25545 Query 305 AACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGT 364 ||||| ||||| || || ||| || | | |||||||| | ||||| || || || Sbjct 25546 CACCGAGGGCTCGTTGGCGAGGATCCCCTGATTTCGCACGTAGACCAGGGTATTCGCCGT 25605 Query 365 GCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCC 400 ||| || ||||||| || ||| | ||||| | ||| Sbjct 25606 GCCGAGATCAATGGCCAGGTCGGTCGAAAAGAGGCC 25641 >seq158 Length=501638 Score = 80.6 bits (88), Expect = 7e-13 Identities = 185/275 (67%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 |||| |||| |||||||| || || |||| |||| ||| |||||||||||| || Sbjct 27942 GTGAGCCTTCTTGATGAAATAGCTCAACATCGCCTCGGTGACTTCGAAGTCGGCGATGAC 28001 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 |||||||| |||||||| ||||||| | | || || || || || ||||| ||| Sbjct 28002 CCCGTCTTTGATCGGACGGATGGCAGTGACCTGTCCGGGCGTTCGACCCAGCATATCCTT 28061 Query 248 GGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGG--GTCCGAATGG-CCAC 304 ||| || ||||| || | || | ||| ||| || ||| || ||| |||| Sbjct 28062 GGCTTCACGTCCGACCGCGAGGA---TGCGACGATCACCGCGGGTGTCGGACTGGACCAC 28118 Query 305 AACC---GATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGC 361 |||| || || || | | ||||| || | |||||||| || ||||| | Sbjct 28119 AACCACGGAGGGTTCGTCGATCACGATCCCCTTACCTTTGACGTAAATCAGCGTGTTCGA 28178 Query 362 AGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACA 396 || || || || |||| ||| || | ||||||| Sbjct 28179 GGTACCAAGATCGATGGCAAGGTCATTCGAAAACA 28213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353584799072