Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq360 259 1e-66 seq347 259 1e-66 seq331 259 1e-66 seq268 259 1e-66 seq262 259 1e-66 seq249 259 1e-66 seq239 259 1e-66 seq381 246 7e-63 seq1105 232 2e-58 seq280 228 2e-57 seq354 89.7 1e-15 >seq360 Length=28839 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 2745 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 2686 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 2685 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 2626 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 2625 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 2566 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 2565 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 2517 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 2516 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 2459 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 2458 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 2414 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 2413 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 2367 >seq347 Length=42671 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 36500 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 36559 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 36560 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 36619 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 36620 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 36679 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 36680 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 36728 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 36729 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 36786 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 36787 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 36831 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 36832 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 36878 >seq331 Length=49663 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 17820 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 17879 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 17880 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 17939 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 17940 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 17999 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 18000 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 18048 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 18049 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 18106 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 18107 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 18151 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 18152 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 18198 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 21343 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 21284 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 21283 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 21224 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 21223 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 21164 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 21163 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 21115 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 21114 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 21057 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 21056 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 21012 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 21011 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 20965 >seq268 Length=42779 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 41052 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 40993 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 40992 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 40933 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 40932 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 40873 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 40872 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 40824 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 40823 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 40766 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 40765 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 40721 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 40720 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 40674 >seq262 Length=94814 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 45032 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 44973 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 44972 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 44913 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 44912 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 44853 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 44852 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 44804 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 44803 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 44746 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 44745 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 44701 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 44700 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 44654 >seq249 Length=73938 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 16285 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 16344 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 16345 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 16404 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 16405 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 16464 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 16465 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 16513 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 16514 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 16571 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 16572 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 16616 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 16617 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 16663 >seq239 Length=192504 Score = 259 bits (286), Expect = 1e-66 Identities = 305/410 (74%), Gaps = 31/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 94894 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 94835 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 94834 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 94775 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 94774 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 94715 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 94714 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 94666 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 94665 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 94608 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 94607 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 94563 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 94562 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 94516 >seq381 Length=26942 Score = 246 bits (272), Expect = 7e-63 Identities = 303/410 (74%), Gaps = 33/410 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 2193 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 2252 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 2253 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 2312 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||||||| |||||| |||| ||| ||||||||| ||| Sbjct 2313 GGCTGATCATCCTCTCAAACCAGCTACTGATCGTTGCCTTGGTAAGCCATTACCTTACCA 2372 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 2373 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCTTTTCAC 2421 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 2422 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 2479 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || |||||||||| ||||| ||| || ||| | |||| Sbjct 2480 GATTCTCATGTATTACTCACC--TCCGCTACT--------AA--AGCTTG-AGCTT---- 2522 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 2523 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 2569 >seq1105 Length=37519 Score = 232 bits (256), Expect = 2e-58 Identities = 301/410 (73%), Gaps = 37/410 (9%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||| ||||||| || ||| | |||||||| |||||||| Sbjct 34232 TTTACAACCCACAGGCCTTCTTCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 34173 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 34172 GCGAAAAATTCCCCACTGCTGCCTTCCGTAGAAGTCTGGACCGTGTCTCAGTTCCAGTGT 34113 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||| |||| || |||| |||| ||| ||||||||| ||| Sbjct 34112 GGCTGATCATCCTCTCAAACCATCT---GATC--TGCCTTGGTAAGCCATTACCTTACCA 34058 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | |||| || |||| || | | || || Sbjct 34057 ACTAACTAATCAGGCATGAGCTCAT---AT----CAAGGC----AGATTTCTCT-TTCAC 34010 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||| | |||| || |||||| | |||||||| | ||||| ||||||| ||| | Sbjct 34009 TCTT--AAGCATATGGGGCATTAGCTATCGTTTCCAATAGTTATTCCCCTCCTCGAGGTA 33952 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||||||| ||| || ||| | |||| Sbjct 33951 GATTCTCATGTATTACTCACCCGTCCGCTACT--------AA--AGCTTG-AGCTT---- 33907 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| ||||||||||||||||| | ||||||||||||| ||||| Sbjct 33906 ---TCGTTCAACTTGCATGTGTTAGGCATACCGCCAGCGTTCATCCTGAG 33860 >seq280 Length=59840 Score = 228 bits (252), Expect = 2e-57 Identities = 167/194 (86%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||| |||||| ||||||| || |||| |||| | ||||| |||||||| |||| Sbjct 37333 GTGCTTTACGACCCGAGGGCCTTCATCGCACACACGGCGTTGCTGCGTCAGGCTTTCGCC 37274 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37273 CATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 37214 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| |||||||||||||||||||| || | | || |||||||| ||||||| Sbjct 37213 GTGTGGCTGATCATCCTCTCAGACCAGCTATCCGTCTTAGGCTTGGTGGGCCTTTACCCC 37154 Query 181 GCCAACTAGCTAAT 194 ||||| | || || Sbjct 37153 ACCAACAACCTGAT 37140 Score = 228 bits (252), Expect = 2e-57 Identities = 167/194 (86%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||| |||||| ||||||| || |||| |||| | ||||| |||||||| |||| Sbjct 45624 GTGCTTTACGACCCGAGGGCCTTCATCGCACACACGGCGTTGCTGCGTCAGGCTTTCGCC 45565 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45564 CATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 45505 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| |||||||||||||||||||| || | | || |||||||| ||||||| Sbjct 45504 GTGTGGCTGATCATCCTCTCAGACCAGCTATCCGTCTTAGGCTTGGTGGGCCTTTACCCC 45445 Query 181 GCCAACTAGCTAAT 194 ||||| | || || Sbjct 45444 ACCAACAACCTGAT 45431 >seq354 Length=42089 Score = 89.7 bits (98), Expect = 1e-15 Identities = 104/139 (75%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||||||| ||| | || ||| ||| |||| || ||||| ||||||||| | Sbjct 14289 GCCTTCTTCACACATATAGTTTGACTGGGTCAAGCTTTAGCTCATTGCCCAATATTCCTC 14348 Query 79 ACTGCTGCCTCCCGTA-GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||| || ||| |||||| | ||||| ||||| |||| ||| ||||||| Sbjct 14349 ACTGCTGCCTTAAATATAAAGTTTGGACCTTATCTCAATTCCAATGTGACTGTTCATCCT 14408 Query 138 CTCAGACCAGCTAGGGATC 156 | ||||||| || ||||| Sbjct 14409 CAAAGACCAGTTAAGGATC 14427 Score = 89.7 bits (98), Expect = 1e-15 Identities = 104/139 (75%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||||||| ||| | || ||| ||| |||| || ||||| ||||||||| | Sbjct 39545 GCCTTCTTCACACATATAGTTTGACTGGGTCAAGCTTTAGCTCATTGCCCAATATTCCTC 39604 Query 79 ACTGCTGCCTCCCGTA-GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||| || ||| |||||| | ||||| ||||| |||| ||| ||||||| Sbjct 39605 ACTGCTGCCTTAAATATAAAGTTTGGACCTTATCTCAATTCCAATGTGACTGTTCATCCT 39664 Query 138 CTCAGACCAGCTAGGGATC 156 | ||||||| || ||||| Sbjct 39665 CAAAGACCAGTTAAGGATC 39683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222386272448