Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq263 131 4e-26 >seq263 Length=70425 Score = 131 bits (144), Expect = 4e-26 Identities = 175/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAA-CTTACA 37767 ||||| |||||| || || | | ||||| || || ||| | ||||| | ||| | Sbjct 35452 GACCGCACGGGCACAGGAACAAAGGCCGTGTTTGGTCGGCAGATGCGCTTTGATCTTGCG 35511 Query 37768 AGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACT 37827 || | || ||||| |||| || |||||| |||| | ||| ||||| ||||| Sbjct 35512 AGCAGT-TTCCCGCTGCTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAACT 35570 Query 37828 GCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGAT 37887 ||| |||||||| || ||||| ||||| | |||| || | || || ||||| |||| Sbjct 35571 GCTCTGGTTTTTGAAGGGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGAT 35630 Query 37888 TTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCG 37947 |||||||||||||| || ||||| |||||||| |||||| | || ||| ||||||||| Sbjct 35631 CTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGCG 35690 Query 37948 C 37948 | Sbjct 35691 C 35691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130638257833950