Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq263 109 8e-19 >seq263 Length=70425 Score = 109 bits (120), Expect = 8e-19 Identities = 172/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTACGTCC-TATCTCGGCGCACAGATGCGCTTCGATC-TGC 196181 ||||| || |||||||| || | | || | | | | || ||||||||||| |||| ||| Sbjct 35452 GACCGCACGGGCACAGGAACAAAGGCCGTGTTTGGTCGG-CAGATGCGCTTTGATCTTGC 35510 Query 196182 AAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAAC 196241 || | | ||||||||| | || || || ||||| || ||| ||| ||| | |||| Sbjct 35511 GAG-CAGTTTCCCGCTGCTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAAC 35569 Query 196242 TGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTA 196301 |||| ||||| | || || ||||| || || || ||||| || ||||| || || | Sbjct 35570 TGCTCTGGTTTTTGAAGGGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGA 35629 Query 196302 TCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGC 196361 ||||| | |||||||| | ||| || | || || ||||| || || ||||| |||| Sbjct 35630 TCTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGC 35689 Query 196362 G 196362 | Sbjct 35690 G 35690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771531569473560