Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2009 331 2e-88 seq1478 289 5e-76 seq428 280 3e-73 >seq2009 Length=2393 Score = 331 bits (366), Expect = 2e-88 Identities = 237/274 (86%), Gaps = 13/274 (5%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 1813 ATCAGTAGGGTAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTGTT 1872 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 1873 AGTGGGTGAACAATCCAACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACA 1932 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1933 TCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 1992 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG-----GACT--------AAA 259 |||||||||||||| ||||||| || ||| ||||| | ||| ||| Sbjct 1993 ATGGTAACTTTTCTGACACCTCTGGCTTCATGCTTCGAAGAGTTTAACTCTTTACTCAAA 2052 Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| |||||||| |||||| |||| |||| Sbjct 2053 GGATCGGTAGGCCACGCTTTCACCGTTTACATTC 2086 >seq1478 Length=8047 Score = 289 bits (320), Expect = 5e-76 Identities = 175/185 (95%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 6237 TCATCAGTAGGGTAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 6178 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct 6177 TTAGTGGGTGAACAATCCAACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGA 6118 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6117 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6058 Query 211 CTGTG 215 || || Sbjct 6057 CTATG 6053 >seq428 Length=53738 Score = 280 bits (310), Expect = 3e-73 Identities = 172/183 (94%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 44503 ATCAGTAGGGGAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTGTT 44444 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 44443 AGTGGGTGAACAATCCAACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACA 44384 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 44383 TCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 44324 Query 213 GTG 215 || Sbjct 44323 ATG 44321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854382100320