Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq41 190 3e-46 seq148 107 3e-21 >seq41 Length=111429 Score = 190 bits (210), Expect = 3e-46 Identities = 120/130 (92%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 79 TCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGAT 138 ||| ||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||| Sbjct 73977 TCATGTTCCCTGTTAGTGGGTGAACAATCCAACACTTTGCGAATTCTGCTTCGCAATGAT 74036 Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 74037 AGGAAGAGCCCACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACA 74096 Query 199 AGCCAGTTAT 208 |||||||||| Sbjct 74097 AGCCAGTTAT 74106 >seq148 Length=210923 Score = 107 bits (118), Expect = 3e-21 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 134459 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGT 134518 Query 96 GGGTGAACAATC 107 |||| | || || Sbjct 134519 GGGTTACCAGTC 134530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395095744