Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq306 136 7e-30 >seq306 Length=2205 Score = 136 bits (150), Expect = 7e-30 Identities = 173/238 (73%), Gaps = 14/238 (6%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||| || |||| |||||||||||||||||| ||||||||| |||||| ||||||| | Sbjct 476 GGAAGATTTAGGCCATAACAGGTCTGTGATGCTCTTAGATGTCCTGGGCTGCACGCGTAC 417 Query 163 TACACTGACAGAGCCAACGAG-----------TTCATCACCTTGGCCGGA-AGGTCTGGG 210 |||| | || | ||| |||| || | | |||| || | ||| |||| Sbjct 416 TACAATAACGGTACCAGCGAGCGCTATGGTTTTTTAACCCCTTATCCTAATAGGATTGGG 357 Query 211 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270 ||| ||| | |||| | || || ||||| ||| |||| || | ||| | ||||| Sbjct 356 TAAACTTTTCAAACACCGTTATGACAGGGATCGAGGATTGGAA--CATCCTCGTGAACGA 299 Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||||||||| | |||||| | | ||||||||||||||||| |||||| Sbjct 298 GGAATTCCTAGTAAGCGTGGTTCATCATACCACATTGATTACGTCCCTGCCTTTTGTA 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947194563072