Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq306 174 5e-41 >seq306 Length=2205 Score = 174 bits (192), Expect = 5e-41 Identities = 116/128 (91%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 40 CAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 || ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1565 CACTATATCTTGTCACTACCTCCCCGTGTTGGGATTGGGTAATTTGCGCGCCTGCTGCCG 1624 Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 ||||| ||||||||||| | ||||||||||||||||||||||||||| || |||||||| Sbjct 1625 TCCTTAGATGTGGTAGCGATCTCTCAGGCTCCCTCTCCGGAATCGAACACTGATTCCCCG 1684 Query 160 TTACCCGT 167 ||||||| Sbjct 1685 -TACCCGT 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391330304