Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq740 327 2e-87 seq735 327 2e-87 seq761 210 4e-52 >seq740 Length=1068 Score = 327 bits (362), Expect = 2e-87 Identities = 202/216 (94%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 409 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGT 468 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct 469 GGGTGAACAATCCAACACTTTGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 528 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || Sbjct 529 AAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCCTATG 588 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||| ||||||| |||||||||||||||| || ||| Sbjct 589 GTAATTTTTCTGACACCTCTAGCCTCAAACTTTGAG 624 >seq735 Length=1073 Score = 327 bits (362), Expect = 2e-87 Identities = 202/216 (94%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 96 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGT 155 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct 156 GGGTGAACAATCCAACACTTTGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 215 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || Sbjct 216 AAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCCTATG 275 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||| ||||||| |||||||||||||||| || ||| Sbjct 276 GTAATTTTTCTGACACCTCTAGCCTCAAACTTTGAG 311 >seq761 Length=1033 Score = 210 bits (232), Expect = 4e-52 Identities = 127/134 (95%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 134 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGT 75 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct 74 GGGTGAACAATCCAACACTTTGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 15 Query 156 AAGGATCAAAAAGC 169 |||||||||||||| Sbjct 14 AAGGATCAAAAAGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854393301504