Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq481 161 3e-37 seq623 129 2e-27 >seq481 Length=1820 Score = 161 bits (178), Expect = 3e-37 Identities = 108/119 (91%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108 |||||||||||||| ||| | | ||||||||||||||||||||||||||| ||||| ||| Sbjct 99 TTGTCACTACCTCCTCGTATTGAGATTGGGTAATTTGCGCGCCTGCTGCCGTCCTTAGAT 158 Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 |||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||| Sbjct 159 GTGGTAGCGATTTCTCAGGCTCCCTCTCCGGAATCGAACACTGATTCCCCG-TACCCGT 216 >seq623 Length=1262 Score = 129 bits (142), Expect = 2e-27 Identities = 84/91 (92%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 77 GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTC 136 |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct 1262 GGTAATTTGCGCGCCTGCTGCCGTCCTTAGATGTGGTAGCGATTTCTCAGGCTCCCTCTC 1203 Query 137 CGGAATCGAACCCTAATTCCCCGTTACCCGT 167 ||||||||||| || |||||||| ||||||| Sbjct 1202 CGGAATCGAACACTGATTCCCCG-TACCCGT 1173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510388158464