Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq434 77.0 8e-12 >seq434 Length=93640 Score = 77.0 bits (84), Expect = 8e-12 Identities = 85/113 (75%), Gaps = 8/113 (7%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGA----GTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||| | ||| ||||||||||| || | ||||||||| | ||| Sbjct 40166 ATCTTCACGGATATTCTAATTTCACTGAAATAGTAT----TGGAGACAGTAGGGAAGTCG 40111 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 |||| |||||| |||||||| || |||| |||||||||||||||||||||| Sbjct 40110 TTACACCATTCATGCAGGTCTAAAATTACTAGACAAGGAATTTCGCTACCTTA 40058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260791590464