Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq434 114 3e-23 >seq434 Length=93640 Score = 114 bits (126), Expect = 3e-23 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189 |||||| ||||||||| ||| ||| ||||||||||||||| | ||||| || | | Sbjct 40359 AGTTTGGCTGGGGCGGCCGCTTCCTAAAGAGTAACGGAGGTGTACAAAGGTAAATTT-GA 40417 Query 190 TTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCA 249 || ||| | | |||| || ||||||| || |||||||||| || || Sbjct 40418 TTTAATGTTTATTAAATTTTAAGTGTAATGGCAAAATT-TGCTTGACTGCGAGACTAACA 40476 Query 250 AGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTC 309 |||| |||||||||| ||||||| | ||||||||||| | ||| ||| | || || Sbjct 40477 AGTCAAGCAGGGACGTAAGTCGGTCATAATGATCCGGTAATTCTGCGTGGTAAGGTTATC 40536 Query 310 GCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| ||||||||||| ||| || |||||| Sbjct 40537 GCTCAACGGATAAAAGGTACGCTAGGGATA 40566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982393447392