Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq434 78.8 1e-12 >seq434 Length=93640 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/117 (73%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 48 TAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNN 107 ||||| | |||||||| |||| | ||||||||||| | | ||||||| Sbjct 40174 TAATCCGTATCTTCACGGATATTCTAATTTCACTGAAATAGTATTGGAGACAGTAGGGAA 40115 Query 108 NNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 164 |||||||||| |||||||| || |||| |||||||||||||||||||||| Sbjct 40114 GTCGTTACACCATTCATGCAGGTCTAAAATTACTAGACAAGGAATTTCGCTACCTTA 40058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547196464233