Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq434 75.2 3e-11 >seq434 Length=93640 Score = 75.2 bits (82), Expect = 3e-11 Identities = 84/110 (76%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 286 TTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGG 345 |||||||||| | ||| || |||| |||||||||||||||||| | ||||||||| Sbjct 36328 TTTCACTCCCTAAT--GGGTTTTCTTTCACCTTTCCCTCACGGTACTTATACACTATCGG 36271 Query 346 TCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAA 395 | | | | | ||||||| ||||| | ||| || ||||| |||| |||| Sbjct 36270 TTA-TAACAAATATTTAGGTTTGGAAGGTGGGCCTCCCATTTTCAAACAA 36222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241591718528