Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq434 127 3e-27 >seq434 Length=93640 Score = 127 bits (140), Expect = 3e-27 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 108 CGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGA 167 || ||||||||||||| ||| | | ||| ||| ||| | ||| |||||||| Sbjct 41353 CGATCCTCTCGTACTAGATACAAATTTTTTCAGTTTTAAAACGTATATGACAGATAGGGA 41294 Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 || ||||||||| ||||||||| |||||| ||| || || ||||||| |||||||| || Sbjct 41293 CCAAACTGTCTCACGACGTTCTAAACCCAACTCATGTTCCACTTTAATCGGCGAACAACC 41234 Query 228 CAACCCTTGGGACCTACTTCAGCCCCAGGATGAGa 262 ||||||||| |||| ||||||| |||||||| || Sbjct 41233 GAACCCTTGGAACCTTCTTCAGCTCCAGGATGTGA 41199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780794954812