Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2870 233 3e-59 >seq2870 Length=1558 Score = 233 bits (258), Expect = 3e-59 Identities = 192/229 (84%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||| ||| ||| | Sbjct 955 GTACAAAGGGCAGGGACGTATTCAACGCAAGCT-GATGACTTGCGCTTACAAGGCATT-C 898 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| || |||| |||| ||||| ||||| ||||| | | ||||| ||| || Sbjct 897 CTCGTTGAAGATTAATAATTCCAATAATCTAGCCCCAGCACGACGCAGTTTCACAAGGTT 838 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || | ||| |||||||| | | |||| || || | ||||||||||||||||||| Sbjct 837 CTCCAGGCCTTCCGGCCAAGAAGCCA--CTCGCTGCATGCGTCAGTGTAGCGCGCGTGCG 780 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 779 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACCTCC 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751978043010