Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2870 188 1e-45 >seq2870 Length=1558 Score = 188 bits (208), Expect = 1e-45 Identities = 202/263 (77%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 57 GCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC 116 ||||| ||| || ||||||| |||||||||||||||||||||||||||| |||||| Sbjct 53 GCCGGCGAGTGCCGATTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTGCTG 112 Query 117 -GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175 |||||||||||||||| ||| | ||| | | || || || ||||||| | | Sbjct 113 TGAATACATTAGCATGGGATATTGGAAGAAGCTCTGG----CTTATTCGTTGGTTGGTGG 168 Query 176 GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235 | | | | || | || ||| | |||||||| ||||| |||||||||||||| Sbjct 169 GCTGGAAGCA-TGGTCAAGAGGAACGGTCGGGGGCACTCGTATTTCATTGTCAGAGGTGA 227 Query 236 AATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 ||||||||||||| | ||||| ||| ||||||||||||| ||||||| ||||||||| Sbjct 228 AATTCTTGGATTTTTGAAAGACGAACAGCTGCGAAAGCGTTTGCCAAGGACGTTTTCATT 287 Query 296 AATCAGTGAACGAAAGTTAGGGG 318 |||| |||||||||||||||| Sbjct 288 GATCA-AGAACGAAAGTTAGGGG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915172415872