Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2262 273 9e-71 seq567 167 1e-38 >seq2262 Length=1458 Score = 273 bits (302), Expect = 9e-71 Identities = 232/281 (83%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||||||| |||||||| | ||||| ||| Sbjct 90 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGGGTGCGAGTGCTCGGGTGGCAA 149 Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC-GTGAGGGTGCACCATCGACC 523 |||| ||||| | |||| |||| || ||||| ||| | | |||||||||| || || Sbjct 150 GCCCGCGCGCGCAGTGAAGGTGATTGG---TGGGAGCCCCGAGCGGGTGCACCACCGTCC 206 Query 524 GATCCTGATGTC-TTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 || ||| | |||| | || |||||| |||||| || |||||||||||||||| Sbjct 207 GACTTTGAGATTGTTCGAAAGG-TTTGAGAGCGAGCATCCATGCTGGGACCCGAAAGATG 265 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 266 GTGAACTATGCCTGAGCAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTG 325 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 326 CTGACGTGCAAATCGCTCGTCGGACTTGGGTATAGGGGCGA 366 >seq567 Length=681 Score = 167 bits (184), Expect = 1e-38 Identities = 136/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||| ||| ||||||||| | || |||| |||| | | | |||||||| Sbjct 250 TCGGCGAGTCGGGTTGCTTGAGAATGCAGCCCCAAGTGGGTGGTAGACTCCATCTAAAGC 191 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| |||| ||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 190 TAAATACTGGCGGGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 131 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || || ||||| ||||| |||||||| Sbjct 130 TGAAAAGAGAGTGAAAGAGGACCTGAAACCGTTGAGGGGGAAGCG 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079935349700