Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2760 298 1e-78 >seq2760 Length=1504 Score = 298 bits (330), Expect = 1e-78 Identities = 312/408 (76%), Gaps = 4/408 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||| ||||||||| ||||||||| |||||||||||||||||||||||| || ||| Sbjct 439 TACCTGAGGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATGC 498 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| |||||||||||||||| | ||| ||| ||||| | ||| Sbjct 499 AAGCGTTATCCGGAATCACTGGGCGTAAAGCGTCTGTAGGTTGTTCAGTAAGTCTAATGT 558 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||| | ||||| |||| |||| ||||| | ||| | ||||||||| || ||| Sbjct 559 TAAAGACTAGGGCTCAACCCTGGAAAAGCATTAGAAACTACTAGACTAGAGTATGGTAGA 618 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||||| ||||||| ||||||||||||||||| ||| |||||||| ||| Sbjct 619 GGTAGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGG 678 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| | ||||| | |||||| || | |||||||| |||||| || || Sbjct 679 CGAAGGCGCTCTACTGGGCCATAACTGACACTGAGAGACGAAAGCTAAGGGAGCGAATAG 738 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||||||||| |||||| || |||||||| ||||| ||||| | ||| | Sbjct 739 GATTAGATACCCTAGTAGTCTTAGCTGTAAACGATGGATACTAGATGTTGCGTGTTT--T 796 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 | | || || |||||||||||||| |||| ||||||||||| || Sbjct 797 TTCATGCAGTGTCGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289561131456