Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1039 396 6e-108 >seq1039 Length=14389 Score = 396 bits (438), Expect = 6e-108 Identities = 299/347 (86%), Gaps = 5/347 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||| |||||||| | ||||||||||||||||||||| Sbjct 12275 GCATCTTCACAGACATGTCTATTTCGCCGAGTCTCTCTCTGAGACAGTGCCCAAATCGTT 12334 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12335 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 12394 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACT-GCTTCGATTGCTCTAACAGATC 185 ||||||||||||||||| |||||||||| || || || |||||| || | ||||| | Sbjct 12395 TAGTTACGGCCGCCGTTCACTGGGGCTTCAG-TCGCTAGCTTCGCTTACGCTAACCAACT 12453 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 | ||||||||||||||| |||||||||||||| || |||||||||||||||||||||| Sbjct 12454 TCTTTAACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATCGTCTTGCGACTTAGCG 12513 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACA 305 || ||||||||||||||||||||||||||||||||| | ||| || ||| | Sbjct 12514 GAGACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGGTTATTGCAACC--CTATA-AAG 12570 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||| ||||||||||| |||||||||||||||||| Sbjct 12571 GGTACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 12617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062367979264