Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2870 297 3e-78 >seq2870 Length=1558 Score = 297 bits (328), Expect = 3e-78 Identities = 227/264 (86%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 ACTCGCTGCATGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 753 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGT--CCCTCTAAGAAGCCAG 119 ||||||||||||| |||| ||| |||| ||| | || ||||||||||||| | Sbjct 752 CCTGTTATTGCCTTAAACCTCCTC---CTGGTTGCCCAGGGTGTCCCTCTAAGAAGCGCG 696 Query 120 C--CACCAACC---ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCG 174 | | |||| | | | ||| | | ||| |||||||||||||||||||||||||| || Sbjct 695 CAGCGCCAATCCGCAGATTCGCCGCG-CTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACG 637 Query 175 GAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 636 GAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAAGAA 577 Query 235 TCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||| Sbjct 576 TCAAGAAAGAGCTCTCAATCTGTC 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796776734934