Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1039 224 2e-56 >seq1039 Length=14389 Score = 224 bits (248), Expect = 2e-56 Identities = 187/229 (82%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| || | |||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 12086 GGGACAGTTTCTGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGC 12027 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||||| | ||||||| ||| ||||| || || | |||| ||||||| ||||| | Sbjct 12026 GTGCAAAGGTTCCCTCAGGCTGGTCGGAAATCAGTCGTAGAGTGTAAAGGCATAAGGGAG 11967 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||| | ||| |||||| ||||| |||||||||||| |||| ||||||||| || Sbjct 11966 CTTGACTGCAAGACCTACAAGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGGCAGT 11907 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | || ||||| ||| ||||||| ||||||||||| ||| || |||||| Sbjct 11906 ACCGAGTGGAAGGGCTGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 11858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982370390464