Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2760 237 3e-60 >seq2760 Length=1504 Score = 237 bits (262), Expect = 3e-60 Identities = 260/335 (78%), Gaps = 18/335 (5%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||| || | || ||||| | | | ||| ||| |||| || |||||||||||||| Sbjct 408 TTTACAACCC-ACGAGCCTTCATCC-CTCACACGGTATTG-CTCCGTCAGGCTTTCGCCC 352 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 351 ATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 292 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 291 TGTGGCTGGCCATCCTCTCAGACCAACTACTGATCGTCGCCTTGGTGAGCCATTACCTCA 232 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| ||| |||| ||| |||| ||| ||| ||| || Sbjct 231 CCAACAAGCTAATCAGACGCGAGCTCTTCT-ATAG-GCA------GAA----AACTG-TT 185 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || || | | | |||| ||||||||| || |||| |||||||||| | || Sbjct 184 TC-ACCTTGCGGCATATGGGGTATTAGCAACCATTTCTAGTTGTTATCCCCCTCCTAAAG 126 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 |||||||| | | ||||||||||||||||| || Sbjct 125 GCAGATTCTCACGTGTTACTCACCCGTCCGCCACT 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071967689920