Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1039 255 2e-65 >seq1039 Length=14389 Score = 255 bits (282), Expect = 2e-65 Identities = 343/471 (73%), Gaps = 26/471 (6%) Strand=Plus/Plus Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195 |||||| ||| || |||||||||||||||||||||| | | || ||||||| ||||| Sbjct 13422 CGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCCGGATTCGATTGGCATTTCA 13481 Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGG 255 |||||| ||||| |||||| || | |||||||| | ||| ||||||| ||||||| | | Sbjct 13482 CCCCTAATCACAGCTCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTCAG 13541 Query 256 TCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGT 313 | ||||| |||||| |||| ||||| ||||||| | |||||||| | || || Sbjct 13542 TGTTACCTAAGCTTCATCCTGGCCATGACTAGATCATCCGGGTTCGGGTCTATAAATAGT 13601 Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC----ACGGGTTA 369 | ||| |||||| || |||||||||||||| |||| || || | ||| Sbjct 13602 G--ACT--AGCGCCCTTATCAGACTCGCTTTCGCTGTGGCT--CCAACTAGTTTGTTTTA 13655 Query 370 ACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGG 428 |||| | ||| || | || |||| |||||||||||||| ||||||| || | | Sbjct 13656 ACCT---GCCACTACCTATAAGTCGCCGGCTCATTCTTCAACAGGCACGAGGTTAGACGA 13712 Query 429 TACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCA 488 | || | | || | || | ||||| || ||||||||| || |||||||| Sbjct 13713 T---TAGTCGTC-------CTTCCACTGCTTGTAAGCTTATGGTTTCATGTTCTATTTCA 13762 Query 489 CTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCA 548 ||||| || ||||| ||||||||||||||||||||||||| | | |||||||| | | Sbjct 13763 CTCCCTTCCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGTTTCACTATCGGTTATCT 13822 Query 549 AGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||| ||||||| |||| |||||||| | |||||| ||| ||||| Sbjct 13823 AGGAATATTTAGCCTTACGAGGTGGTCCTCGCTGATTCATACGGGGTTTCA 13873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817545217536