Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq2760 223 7e-56 >seq2760 Length=1504 Score = 223 bits (246), Expect = 7e-56 Identities = 232/300 (77%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||||||||| Sbjct 371 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 312 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | || |||||||| || |||| |||||||| Sbjct 311 GGGCCGTGTCTCAGTCCCAGTGTGGCTGGCCATCCTCTCAGACCAACTACTGATCGTCGC 252 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||||| || |||| ||||||||| | |||||| | ||||||| | ||| | || | | Sbjct 251 CTTGGTGAGCCATTACCTCACCAACAAGCTAATCAGACGCGAGCTCTTCTAT-AGGCAGA 193 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 || || | ||| || | | | || |||| ||||||||| | |||| Sbjct 192 AAACTGT-TTCA----------CCTTGC---GGCA-TATGGGGTATTAGCAACCATTTCT 148 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306 | ||||| || ||| |||||||| || |||||||||||||||||||||||||||||| Sbjct 147 AGTTGTTATCCCCCTCCTAAAGGCAGATT-CTCACGTGTTACTCACCCGTCCGCCACTAA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998369908224