Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2760 113 4e-23 >seq2760 Length=1504 Score = 113 bits (124), Expect = 4e-23 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||| ||| |||||||| | ||| | | || | ||| || |||||||| | || | Sbjct 1274 CGAGTTTCAGCCTACAATCTGAACTGAGGCTAGA-TTTATGAGATTAGCTTACTTTCACA 1216 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||| || | || ||| ||||||||| ||||||| ||||| | |||||| || Sbjct 1215 AGTTTGCAACTCTTTGTTCTAACCATTGTAGCACGTGTGTAGCCCAGAACGTAAGGGGCA 1156 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||||||||||||||||||||||||| Sbjct 1155 TGCTGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 1115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415987853580