Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq2760 221 2e-55 >seq2760 Length=1504 Score = 221 bits (244), Expect = 2e-55 Identities = 222/286 (78%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||||| | |||| | |||||||||||||||||||| || Sbjct 723 GCTTTCGTCTCTCAGTGTCAGTTATGGCCCAGTAGAGCGCCTTCGCCACTGGTGTTCTTC 664 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||||||||||||||||||||||| |||||||| | ||||| | |||| || Sbjct 663 CCAATATCTACGCATTTCACCGCTACACTGGGAATTCCCTCTACCTCTACCATACTCTAG 604 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGACTTGCC 184 | |||||| ||||| ||||||||||| |||| ||| |||| ||||| | Sbjct 603 TCTAGTAGTTTCTAATGCTTTTCCAGGGTTGAGCCC-TAGTCTTTAACATTAGACTTACT 545 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 | |||||| | |||||| |||| | | |||||||||||||||| || |||||| Sbjct 544 GAACAACCTACAGACGCTTTACGCCCAGTGATTCCGGATAACGCTTGCATCCCCCGTATT 485 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 484 ACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTCAGGTA 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828775800594