Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2870 95.1 1e-17 >seq2870 Length=1558 Score = 95.1 bits (104), Expect = 1e-17 Identities = 132/181 (73%), Gaps = 7/181 (4%) Strand=Plus/Plus Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCT-CGAATACATTACC 67 || ||||||| |||||||||||||| ||||||||||||| |||||| |||||||||| | Sbjct 66 GATTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTGCTGTGAATACATTAGC 125 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||| ||| | ||| | | || || || || |||| | || | | | || Sbjct 126 ATGGGATATTGGAAGAAGCTCTG----GCTTATTCGTTGGTTGGT-GGGCTGGAAG-CAT 179 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 | | || | | | |||||||| ||||| ||||||| |||||||||||||||||| Sbjct 180 GGTCAAGAGGAACGGTCGGGGGCACTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATT 239 Query 188 T 188 | Sbjct 240 T 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511985050560