Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2760 273 5e-71 >seq2760 Length=1504 Score = 273 bits (302), Expect = 5e-71 Identities = 306/410 (75%), Gaps = 32/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| |||||| || ||| ||| || ||| | |||||||| |||||||| Sbjct 408 TTTACAACCCACGAGCCTTCATCCCTCACACGGTATTGCTCCGTCAGGCTTTCGCCCATT 349 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 348 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 289 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 |||||| ||||||||||||||| ||| ||||||||||| |||| ||||||||| | ||| Sbjct 288 GGCTGGCCATCCTCTCAGACCAACTACTGATCGTCGCCTTGGTGAGCCATTACCTCACCA 229 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 || |||||||| | | | || | | |||| ||| || || ||| Sbjct 228 ACAAGCTAATCAGACGCGAGCTC-TTCTATAGGCAGA------AA------ACTGTTTCA 182 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 |||||| | |||| ||||||||| ||| |||| ||| ||||||||||||| ||||| Sbjct 181 CCTTGCGGC-ATATGGGGTATTAGCAACCATTTCTAGTTGTTATCCCCCTCCTAAAGGCA 123 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || |||||||||||||||||||| | |||| | Sbjct 122 GATTCTCACGTGTTACTCACCCGTCCGCCACT-AAAACCGAA-----------------G 81 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || ||| |||||||||||||||| || | ||||||||||||| ||||| Sbjct 80 TTTTCGTACGACTTGCATGTGTTAAGCATACCGCCAGCGTTCATCCTGAG 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222363156864