Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2760 331 2e-88 >seq2760 Length=1504 Score = 331 bits (366), Expect = 2e-88 Identities = 320/409 (78%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| |||||| |||| ||||||||| |||||||||||||||||||||||| || || Sbjct 439 TACCTGAGGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATGC 498 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||||| ||||||||||||| || |||||| ||| |||||| | || Sbjct 499 AAGCGTTATCCGGAATCACTGGGCGTAAAGCGTCTGTAGGTTGTTCAGTAAGTCTAATGT 558 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| ||| |||||||||| || | || || |||||| | | ||||||| | || Sbjct 559 TAAAGACTAGGGCTCAACCCTGGAAAAGCATTAGAAACTACTAGACTAGAGTATGGTAGA 618 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | |||||||| ||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 619 GGTAGAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACACCAGTGG 678 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| | |||| | |||||||||||||| ||||||| |||||| || || Sbjct 679 CGAAGGCGCTCTACTGGGCCATAACTGACACTGAGAGACGAAAGCTAAGGGAGCGAATAG 738 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 ||||||||||||| |||||| || |||||||||| ||||||| ||| ||| | Sbjct 739 GATTAGATACCCTAGTAGTCTTAGCTGTAAACGATGGATACTAGATGT---TGCGTGTTT 795 Query 361 GTGC-TCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | | ||| || ||| ||||| ||||||| || ||||||||||| Sbjct 796 TTTCATGCAGTGTCGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203163735552