Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1039 116 7e-24 >seq1039 Length=14389 Score = 116 bits (128), Expect = 7e-24 Identities = 177/246 (72%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGATAAGCTGC 66 ||||||||| |||||| ||| | |||||||||| ||| | || | ||| | ||| | Sbjct 14259 ATGGTGGATACCTTGGTATTTAGAAGCGATGAAGGGCGTGACTACCGA-CGAAACGCTAC 14201 Query 67 GGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG 126 ||||||| | || | | |||||||| || | ||||||| |||||| | | Sbjct 14200 GGGGAGTTGG-AAGTAAGCATTGATCCGTAGGTACCCGAATGAGGAAACTCC------TA 14148 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTA 185 | | || | |||||| ||||| | || ||| ||| |||||||||||||||| Sbjct 14147 GAACTTTT--TTCTGAATCAATAGGAAAAAAAGAGCAAACCTAGCGAACTGAAACATCTT 14090 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 ||||||| ||||||||||| ||| | ||||||| ||||||||||| ||||| |||| Sbjct 14089 AGTAGCTAGAGGAAAAGAAAGCAAAAGCGATTCCCTTAGTAGTGGCGAACGAAACGGGAA 14030 Query 246 GAGCCT 251 ||||| Sbjct 14029 CAGCCT 14024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918372319424