Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2760 168 1e-39 >seq2760 Length=1504 Score = 168 bits (186), Expect = 1e-39 Identities = 204/279 (73%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 479 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTCAGGTACCGTCA------------- 433 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 ||| || || ||| | |||||| |||||||| || || ||||||||| |||| | Sbjct 432 -GAAC---TTCTTTCCTGAGAAAAGAGGTTTACAACCCAC-GAGCCTTCATCCCTCACAC 378 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 377 GGTATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 318 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | || |||||||||| | ||| || Sbjct 317 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGCCATCCTCTCAGACCAACTACTGAT 258 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | || |||| ||| ||||| | || || | ||||| Sbjct 257 CGTCGCCTTGGTGAGCCATTACCTCACCAACAAGCTAAT 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068767786368