Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2390 120 5e-25 >seq2390 Length=1365 Score = 120 bits (132), Expect = 5e-25 Identities = 102/123 (83%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || ||| || | ||| |||||||| |||| ||| || | Sbjct 955 GTACGAGAGGAACTGTTGA-TTCGGACCACG-GGTACATGCGGCTGGCTGAACAGCCAAT 1012 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||| | Sbjct 1013 GCCGCGACGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCATGCTA 1072 Query 121 GAA 123 ||| Sbjct 1073 GAA 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819176080896