Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_030150.1 Length=1280 Score E Sequences producing significant alignments: (Bits) Value seq338 143 2e-31 >seq338 Length=7727 Score = 143 bits (158), Expect = 2e-31 Identities = 192/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 605 CCTGGAGTGGGAAAATCTCGACGAGCTCATGAAGAACTACCAGAAGCTTATGTGAAGGAA 664 || ||||| ||||| || ||| ||||||||| | | ||||| |||||||||||||| Sbjct 639 CCCGGAGTTGGAAAGTCAAGACTGGCTCATGAACGAATGCCAGACGCTTATGTGAAGGAT 698 Query 665 CCACGCACCAAGTGGTGGAATAACTATTTCGGAGAGAAGGATGTCATCATCGATGACTTT 724 ||||||| ||| || |||||| ||| | |||| | | || || || || ||||| Sbjct 699 CCACGCAACAAATGTTGGAATGGCTACATGCTCGAGACGCAAGTTATAATTGAGGACTTC 758 Query 725 GGACCTTTAGGAATAGATATCAATCATCTGTTAAGGTGGTTTGACAGATATAAGTGTTTC 784 || || |||||| |||||||| || | ||||||||||||| |||| ||||| | Sbjct 759 GGTCCAAAAGGAATTGATATCAACCACTTACTAAGGTGGTTTGATCGATACAAGTGCAAC 818 Query 785 GTGGAGTATAAGGGAGGTATGCTGCCGCTTGTGGCAGATAACTTCATAGTAACTAGTAAC 844 || ||||| |||| ||| ||| |||| || ||||| | | || || || || ||| Sbjct 819 GTCGAGTACAAGGCAGGAATGATGCCTCTATACGCAGAACAGTGGATCGTGACAAGCAAC 878 Query 845 TTCCATCCATACGATGTATTCAAGGAT 871 || ||||| ||| | |||||| || Sbjct 879 TTTCATCCGAGGGATATTTTCAAGTAT 905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3990275970886