Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq25966 129 4e-28 seq20132 129 4e-28 seq38752 120 2e-25 seq5550 120 2e-25 seq5849 71.6 1e-10 >seq25966 Length=3938 Score = 129 bits (142), Expect = 4e-28 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||||||||||||||||| | | |||||||||| | Sbjct 1707 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAAACCTACCGTGGTAAGCGGGC 1648 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| ||||| |||||| | | |||||||||||||||||||||||||| Sbjct 1647 TCCTTACGGTTACCCTACCCACTTCTGGCGGATTCCACTCCCATGGTGTGACGGGCGGTG 1588 Query 135 TGTA 138 |||| Sbjct 1587 TGTA 1584 >seq20132 Length=1115 Score = 129 bits (142), Expect = 4e-28 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||||||||||||||||| | | |||||||||| | Sbjct 162 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAAACCTACCGTGGTAAGCGGGC 103 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| ||||| |||||| | | |||||||||||||||||||||||||| Sbjct 102 TCCTTACGGTTACCCTACCCACTTCTGGCGGATTCCACTCCCATGGTGTGACGGGCGGTG 43 Query 135 TGTA 138 |||| Sbjct 42 TGTA 39 >seq38752 Length=1498 Score = 120 bits (132), Expect = 2e-25 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||| ||| | ||||||| |||||||| Sbjct 1156 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCTGCCGTGGTAATCGCCCTCC 1215 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct 1216 TTGCGGTTAGGCTAACTACTTCTGGCAGAACCCGCTCCCATGGTGTGACGGGCGGTGTGT 1275 Query 138 A 138 | Sbjct 1276 A 1276 >seq5550 Length=2568 Score = 120 bits (132), Expect = 2e-25 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||| ||| | ||||||| |||||||| Sbjct 1072 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCTGCCGTGGTAATCGCCCTCC 1131 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct 1132 TTGCGGTTAGGCTAACTACTTCTGGCAGAACCCGCTCCCATGGTGTGACGGGCGGTGTGT 1191 Query 138 A 138 | Sbjct 1192 A 1192 >seq5849 Length=3646 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||| ||||||||||| | | |||| | || | Sbjct 3479 CCCTACGGCTACCTTGTTACGACTTAACCCCAGTCATCGACTTTACCGTGGCAGGCTGCT 3420 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| |||| ||| | |||| |||||||||| |||||||| ||| Sbjct 3419 TCCTTACGGTTAGCGCACCTGCTTAAGGTAAAACCAACTCCCATGGCTTGACGGGCAGTG 3360 Query 135 TGTA 138 |||| Sbjct 3359 TGTA 3356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345435378840