Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq48268 107 2e-21 seq38752 102 8e-20 seq5550 102 8e-20 seq2809 98.7 9e-19 seq30149 89.7 5e-16 seq25966 87.8 2e-15 seq20132 87.8 2e-15 seq42319 86.0 6e-15 seq22555 86.0 6e-15 >seq48268 Length=944 Score = 107 bits (118), Expect = 2e-21 Identities = 95/116 (82%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCG-GAGGCGAAGAAGGACGTGATAAGCTGCGAAAA 59 |||| |||||||||||| ||| ||| ||||||| |||||||||| || ||||||| || Sbjct 296 GGCATTCGGTGGATGCCTTGGCG-TCGAGAGGCGATGAAGGACGTGGTACGCTGCGATAA 238 Query 60 GCTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 |||||||||| || | | | ||||||||||||| ||||||||||| |||||| Sbjct 237 GCTACGGGGAGCTGCGAACAAGCTTTGATCCGTAGATTTCCGAATGGGGAAACCCG 182 >seq38752 Length=1498 Score = 102 bits (112), Expect = 8e-20 Identities = 88/108 (81%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||||||||||||||||| |||||| ||||| |||| Sbjct 476 GGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 417 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||||| || | |||||||| |||| ||||||||||| ||||| Sbjct 416 GAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 369 >seq5550 Length=2568 Score = 102 bits (112), Expect = 8e-20 Identities = 88/108 (81%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||||||||||||||||| |||||| ||||| |||| Sbjct 315 GGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 256 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||||| || | |||||||| |||| ||||||||||| ||||| Sbjct 255 GAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 208 >seq2809 Length=5502 Score = 98.7 bits (108), Expect = 9e-19 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| |||||||| ||| ||||||||| ||||||| |||||||||| Sbjct 1162 GGTGGATGCCTTGGCGGCAGGAGGCGATGAAAGACGTGATAGGCTGCGATAAGCTACGGG 1221 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || || ||| ||||||||||||| || |||||||| ||||| Sbjct 1222 GAAGTGCCAATAACTTTTGATCCGTAGATCTCTGAATGGGGAAACCC 1268 >seq30149 Length=517 Score = 89.7 bits (98), Expect = 5e-16 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| ||| || ||||||| |||||||||| || ||||||| ||| Sbjct 352 GGCATTCGGTGGATGCCTTGGCGCTAAGAGGCGATGAAGGACGTGGTACGCTGCGATAAG 411 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | ||||| || | | | ||||||||| || ||||||||||| ||||| Sbjct 412 TCATGGGGAGCCGCGAACAGGCTTTGATCCGTGAATTTCCGAATGGGGAAACCC 465 >seq25966 Length=3938 Score = 87.8 bits (96), Expect = 2e-15 Identities = 131/180 (73%), Gaps = 7/180 (4%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||||| | ||||||||||| |||| Sbjct 2332 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAAAGCAGCGGG 2391 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 || ||||| | |||||||| ||| ||||||||||| ||||| |||| Sbjct 2392 GAGCTGGCAATGGAGCTTTGATCCGCTGATGTCCGAATGGGGAAACCCCTCCGCAAGGAG 2451 Query 127 AT--ATATCATAACGC-TAGGC--GT-TAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || | | ||| | ||||| || |||||||| || ||||||||||||||||||| Sbjct 2452 ATCCCTGGCTGAACACATAGGCCAGTGGAGGCGAACCGGGAGAACTGAAACATCTAAGTA 2511 >seq20132 Length=1115 Score = 87.8 bits (96), Expect = 2e-15 Identities = 131/180 (73%), Gaps = 7/180 (4%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||||| | ||||||||||| |||| Sbjct 704 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAAAGCAGCGGG 763 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 || ||||| | |||||||| ||| ||||||||||| ||||| |||| Sbjct 764 GAGCTGGCAATGGAGCTTTGATCCGCTGATGTCCGAATGGGGAAACCCCTCCGCAAGGAG 823 Query 127 AT--ATATCATAACGC-TAGGC--GT-TAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || | | ||| | ||||| || |||||||| || ||||||||||||||||||| Sbjct 824 ATCCCTGGCTGAACACATAGGCCAGTGGAGGCGAACCGGGAGAACTGAAACATCTAAGTA 883 >seq42319 Length=3671 Score = 86.0 bits (94), Expect = 6e-15 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||||||| | ||||||| ||||||||||||| ||||| |||| | ||| Sbjct 2081 GGTGGATGCCTAGGCAGTAAGAGGCGATGAAGGACGTGATACCCTGCGTTAAGCCATGGG 2140 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 2141 GAGCCGGGAATAGGCTTTGATCCATGGATGTCCGAATGGGGGAACCC 2187 >seq22555 Length=2992 Score = 86.0 bits (94), Expect = 6e-15 Identities = 135/187 (72%), Gaps = 15/187 (8%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| || ||||||| ||||||||| ||| |||||||||| | | Sbjct 2594 ACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTACTAACCTGCGAAAAGTTGTG 2535 Query 66 GGGAT-TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC----GATATA 120 | || ||| | | | | ||||| || | || ||||||||||| ||||| ||| || Sbjct 2534 GTGAGCTGGTA-AGAAGCATTGACCCACAAATGTCCGAATGGGGAAACCCACCTGATTTA 2476 Query 121 T--TGGAGATATATCATAACGC-TAGGCGTT----AGGCGAACGTGGGGAACTGAAACAT 173 | | | | || | || | ||| ||| |||||||| || |||||||||||| Sbjct 2475 TCAGGTATCTTTAACTGAATACATAG--GTTAAAGAGGCGAACCGGGAGAACTGAAACAT 2418 Query 174 CTAAGTA 180 ||||||| Sbjct 2417 CTAAGTA 2411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476565313229