Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq25966 581 8e-164 seq5550 567 2e-159 seq5841 398 2e-108 seq42319 331 2e-88 seq36788 329 8e-88 seq5840 325 1e-86 seq5849 318 2e-84 seq13716 217 4e-54 seq47862 185 2e-44 seq33506 122 2e-25 >seq25966 Length=3938 Score = 581 bits (644), Expect = 8e-164 Identities = 373/407 (92%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 736 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct 737 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGATAAGCCAGATGT 796 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||||| ||| ||| |||||| ||| |||| |||| |||||||||| |||||| Sbjct 797 GAAATCCCCGAGCTCAACTTGGGAACTGCGTTTGGAACTGTCAGACTAGAGTGCGTCAGA 856 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct 857 GGGGGGTGGAATTCCGCGTGTAGCAGTGAAATGCGTAGAGATGCGGAGGAACACCGATGG 916 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 917 CGAAGGCAGCCCCCTGGGATGACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 976 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||| || Sbjct 977 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAATTAGCTGTTGGGGGTTAGAA 1036 Query 363 TCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||| ||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct 1037 TCCCTGGTAGCGTAGCTAACGCGTGAAATTGACCGCCTGGGGAGTAC 1083 >seq5550 Length=2568 Score = 567 bits (628), Expect = 2e-159 Identities = 372/408 (91%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2094 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 2035 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 2034 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGCAAGACAGAGGT 1975 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| Sbjct 1974 GAAATCCCCGGGCTCAACCTGGGAACTGCCTTTGTGACTGCATAGCTAGAGTACGGTAGA 1915 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 1914 GGGGGATGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGATGG 1855 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1854 CGAAGGCAATCCCCTGGGCCTGTACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 1795 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTAC 361 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| | || | Sbjct 1794 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGGAGGGTTTC 1735 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||| | ||||||||||||||||||||||||||||||||||||| ||| Sbjct 1734 TTC-TCAGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC 1688 >seq5841 Length=1512 Score = 398 bits (440), Expect = 2e-108 Identities = 333/403 (83%), Gaps = 5/403 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 1090 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTT 1149 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||||| ||| ||| |||| |||| | ||||||| || Sbjct 1150 AATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGTTGGATGTGAAAGCC 1209 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAGGGGGG 188 ||||||| |||||||||| ||||| |||| ||| ||||||| || |||||| || Sbjct 1210 CCGGGCTCAACCTGGGAACTGCATCCAAAACTG-GCGAGCTAGAGTATGGTAGAGGGTGG 1268 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 ||||||| | ||||||| ||||||||||||||||| | |||||||||| ||||||||| Sbjct 1269 TGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGG 1328 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | || ||||| | | |||||| || | | |||||||||||||||||||||||||||| Sbjct 1329 CGACCACCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAG 1388 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT--TTACTTCCT 366 |||||||||||||||||||| |||||||| |||||||| ||| || || || | Sbjct 1389 ATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTT-GGAATCCTTGAGATTT 1447 Query 367 TGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || ||||||||| | |||||||||||||||||| ||| Sbjct 1448 TAGTGGCGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTAC 1490 >seq42319 Length=3671 Score = 331 bits (366), Expect = 2e-88 Identities = 270/328 (82%), Gaps = 0/328 (0%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 415 AGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTT 474 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||| || |||||| | ||| |||| ||||||||| Sbjct 475 GTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACTGGAAAGTCAGGGGTGAAATCC 534 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| |||| |||| ||| |||| ||| | | || ||| | ||||| | || Sbjct 535 CGGGGCTCAACCCCGGAACTGCCTTTGAAACTCCCAGTCTTGAGGTCGAGAGAGGTGAGT 594 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| |||||||||||| |||||||||| Sbjct 595 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGC 654 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| | ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 655 GGCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 714 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||||||||| Sbjct 715 TACCCTGGTAGTCCACGCCCTAAACGAT 742 >seq36788 Length=1761 Score = 329 bits (364), Expect = 8e-88 Identities = 317/407 (78%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | |||| |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 1637 TACCAGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGC 1578 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||| ||||||| ||||||||||||||| || |||||| | |||| |||| || Sbjct 1577 TAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCACGTAGGCGGATCAATAAGTCAGGGGT 1518 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||| |||| ||||| |||| ||| |||| |||| || |||| | ||| Sbjct 1517 GAAATCCCGAGGCTCAACCTCGGAACTGCCTTTGATACTGTTGACCTTGAGTCCGGGAGA 1458 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| ||| |||||| ||||||| ||||||||| ||| |||||||| ||| Sbjct 1457 GGTGAGTGGAACTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGG 1398 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| || | |||| ||||||||| | | |||||||||||||||||||||| Sbjct 1397 CGAAGGCGGCTCACTGGCCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAG 1338 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||||||||||||||||| |||||||| | |||| || ||| | Sbjct 1337 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGAAGCTAGCCGTCGGGCAGCATGC 1278 Query 363 TCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | | ||| || ||||||||| | ||| | ||||||||||| ||| Sbjct 1277 TGTTCGGTGGCGCAGCTAACGCATTAAGCTTCCCGCCTGGGGAGTAC 1231 >seq5840 Length=1738 Score = 325 bits (360), Expect = 1e-86 Identities = 211/229 (92%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1512 TACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 1571 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 1572 A-GCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGTAAGACAGATGT 1630 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||||||||| |||||||||| |||||||||||||||| ||||||| | ||| Sbjct 1631 GAAATCCCCGGGC-TAACCTGGGACCTGCATTTGTGACTGCATAGCTAGAGTACGGTAGA 1689 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGG 231 ||||| ||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 1690 GGGGGATGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGG 1738 >seq5849 Length=3646 Score = 318 bits (352), Expect = 2e-84 Identities = 312/400 (78%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || ||| || Sbjct 2457 AGAAAAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCATT 2516 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||||||||||||||||||||| |||| ||| ||||| | ||||||||| Sbjct 2517 ACTCGGAATTACTGGGCGTAAAGCGTGCGTAGGCTGTTTAGTAAGTTGGAAGTGAAATCC 2576 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||| ||| ||||||| || ||||| |||||||||| ||||| | Sbjct 2577 TGGAGCTCAACTCCAGAATTGCTTTCAAAACTGCTTGACTAGAGTGCTAGAGAGGATAGC 2636 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| ||||||||||| ||||| || Sbjct 2637 GGAATTCCTAGTGTAGAGGTGAAATTCGTAGATATTAGGAGGAACACCGGAAGCGAAAGC 2696 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || |||| | ||||||||| |||||||||||||||||| |||||||||||||| Sbjct 2697 GGCTATCTGGCTAGATACTGACGCTGTTGCACGAAAGCGTGGGGATCAAACAGGATTAGA 2756 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| |||| | || ||| ||| | ||| | Sbjct 2757 TACCCTGGTAGTCCACGCAGTAAACGATGAGCGCTAGATATT-AGGACTTAGAT-CTTAG 2814 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | |||||||||||||| ||| ||||||||||| ||| Sbjct 2815 TGTCGTAGCTAACGCGTTAAGCGCTCCGCCTGGGGAGTAC 2854 >seq13716 Length=566 Score = 217 bits (240), Expect = 4e-54 Identities = 186/228 (82%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 112 AAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAG 171 ||| |||| |||||||||| ||||| |||| |||| ||| |||| ||| | | || | Sbjct 549 AAGTCAGGGGTGAAATCCCGGGGCTCAACCCCGGAACTGCCTTTGAAACTCCCAGTCTTG 490 Query 172 AGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGG 231 || | ||||| | |||||||||| |||||| ||||||| ||||||||| ||||| Sbjct 489 AGGTCGAGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGG 430 Query 232 AACACCAATGGCGAAGGCAGCCCCCTGG--GATAACACTGACGCTCATGCACGAAAGCGT 289 ||||||| |||||||||| || | |||| ||| ||||||||| | | ||||||||| Sbjct 429 AACACCAGTGGCGAAGGCGGCTCACTGGCCGAT---ACTGACGCTGAGGTGCGAAAGCGT 373 Query 290 GGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 GGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 325 >seq47862 Length=579 Score = 185 bits (204), Expect = 2e-44 Identities = 104/105 (99%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 475 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 534 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 579 >seq33506 Length=1068 Score = 122 bits (134), Expect = 2e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | ||||||||| |||||||||| |||||||||||||||||||| ||| |||| || Sbjct 976 TACCCGCAGAATAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAAGACGAAGGGGGC 1035 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCG 94 |||||| ||||||||||||||||||||||| Sbjct 1036 TAGCGTTGTTCGGAATTACTGGGCGTAAAGCG 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288944767136