Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq22555 520 2e-145 seq20133 443 5e-122 seq5548 354 2e-95 seq35950 333 7e-89 seq43636 311 2e-82 seq21152 302 1e-79 seq24946 298 1e-78 seq2809 264 3e-68 seq17492 161 3e-37 seq32140 104 6e-20 >seq22555 Length=2992 Score = 520 bits (576), Expect = 2e-145 Identities = 371/426 (87%), Gaps = 0/426 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || || |||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct 591 CGCGGGTATACGGCATCTTCACCGCAATTTCAATTTCACTGAGTCTCGGCTGGAGACAGC 650 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 CTGGCCATCATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 710 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 711 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCTTGC 770 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct 771 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCCTCTT 830 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || ||||||| |||||||||||||||||||||||| ||||| ||||| || |||| Sbjct 831 ACGAGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTCACTGCGACT 890 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 | |||||| ||||| |||||| | ||| ||||||||||||||||||| Sbjct 891 CTCCGATGCTTACACCGCAAGGGCTTCACATTAGAGAGCGTACCTTCTCCCGAAGTTACG 950 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 || | ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 951 GTACTATTTTGCCTAGTTCCTTCAGCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCT 1010 Query 421 AACCAC 426 ||||| Sbjct 1011 GACCAC 1016 >seq20133 Length=1753 Score = 443 bits (490), Expect = 5e-122 Identities = 345/407 (85%), Gaps = 12/407 (3%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61 |||| || | |||||||||||| ||||||| ||| ||||||||| || |||||||| | Sbjct 1353 GCGGGTAGATTGCATCTTCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTG 1412 Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1413 TGGCCATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 1472 Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG 181 |||||||||||| |||||||||||||||||| ||| |||| ||||||||||| || Sbjct 1473 TAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC----- 1526 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 ||||||||| |||| ||||| |||||||||||||||||| || |||||||||||||| Sbjct 1527 ---ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACTCCGTATACGTCCACTTT 1583 Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG 301 |||||| ||| || ||||||||||| |||||||||||||| ||| | ||| ||||| Sbjct 1584 CGTGTTGGCACAGAGCTGTGTTTTTGTTAAACAGTCGCAGCCACCTATTCTCTGCGACCT 1643 Query 302 GCATGAGCTTACGGA-GC-AAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 || ||||| |||| || ||||||| |||| || ||| ||||||||||||||||||| Sbjct 1644 CTATCAGCTT-CGGACGCGAAGTCCTACACCGACAGAGGCACACCTTCTCCCGAAGTTAC 1702 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTT 406 |||| | |||||| ||||||||| || ||||||||||||||||||| Sbjct 1703 GGTGTCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTT 1749 >seq5548 Length=810 Score = 354 bits (392), Expect = 2e-95 Identities = 248/282 (88%), Gaps = 9/282 (3%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| ||||||||| || |||||||| Sbjct 326 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGT 267 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 207 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||| |||||||||| || Sbjct 206 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGCTT-GC---- 152 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| Sbjct 151 ----ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTT 96 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 |||| ||||||||||||||||||||||||||||||||||||| Sbjct 95 TCGTCTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 54 >seq35950 Length=2181 Score = 333 bits (368), Expect = 7e-89 Identities = 330/421 (78%), Gaps = 27/421 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| ||||||||| || |||||||| Sbjct 485 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGT 544 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 545 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 604 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTT 179 ||||||||||||| ||||||||||||||||||||||||||| | ||||| |||| || Sbjct 605 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAG-GCTT-GC--- 659 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 ||| | | |||||||||||||||||||||||||||| |||||||||||| || Sbjct 660 -----ACCTCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCT 714 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGAC 299 | || || |||||| ||||||||| ||||||||||| | ||| || | | | | Sbjct 715 TACGGCTTCGCAGAGCCCTGTGTTTTAGGTAAACAGTCGCTACCCCCTAGTCTGTGCCCC 774 Query 300 CGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACC-GGCGCACCTTCTCCCGAAGTTA 358 | | || ||| || || || |||| || | |||||||||||||||| Sbjct 775 CTG-AT--GCT---GG---------TTGCCCAACACCAGGGCCTCCTTCTCCCGAAGTTA 819 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||| | | |||||| ||||||||| | ||||||||||||||||||||| |||||| Sbjct 820 CGGAGGCAATTTGCCGAGTTCCTTCAGCACCATTCTCTCAAGCGCCTTGGTATGCTCTAC 879 Query 419 C 419 | Sbjct 880 C 880 >seq43636 Length=858 Score = 311 bits (344), Expect = 2e-82 Identities = 317/410 (77%), Gaps = 29/410 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || ||||||||||||||||| | ||||||||||| | ||||| Sbjct 511 GCATCTTCACGGGGAATTCAATTTCACTGAGTCGATGCTGGAGACAGCGGGGAAGTCGTT 452 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 451 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 392 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTAACCCCAT 191 | ||||||||||||||||||||||||||| | ||||| |||| || ||| | Sbjct 391 TAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAG-GCTT-GC--------ACCTCTC 342 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | |||||||||||||||||||||||||||| |||||||||||| ||| || || ||| Sbjct 341 CTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCTTACGGCTTCGCA 282 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTT 311 ||| |||||||||| |||||||||||| | |||| | | | | || | | Sbjct 281 GAGCCCTGTGTTTTTGATAAACAGTCGCCACCCCCTGTTTTGT--GCCCCTC----CCCC 228 Query 312 ACGGAGCAAGTCCTTCACCCTCACCGGCG--CACCTTCTCCCGAAGTTACGGTGCCTTTT 369 |||| | ||| | || | | |||| |||||||||||||| | | | Sbjct 227 ACGG----------TTGCCCGCGGAGGAGGCCTCCTTATCCCGAAGTTACGGAGGCAAAT 178 Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||| ||||||||| | |||||||||||||||| ||||| ||||||| Sbjct 177 TGCCGAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTAGGTATGCTCTACC 128 >seq21152 Length=2898 Score = 302 bits (334), Expect = 1e-79 Identities = 321/419 (77%), Gaps = 31/419 (7%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61 |||| ||| | |||||||||| | || ||||||||| | ||| | | ||||||||||| Sbjct 1137 GCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCCGAGCCCATGTTGGAGACAGCG 1196 Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 GGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 1256 Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTA 180 |||||||||||| ||||||||||||||||||||||||||| | ||||| |||| || Sbjct 1257 TAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAG-GCTT-GC---- 1310 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||| | | |||||||||||||||||||||||||||| ||||||||| || || Sbjct 1311 ----ACCTCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACTTCGCCTC 1366 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || || |||||| |||||||||| ||||||||||| | ||| | ||| | || Sbjct 1367 ACGGCTTAGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCCACCCCCTAG--TCTGTGCCC 1424 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 | ||| ||| ||| ||| ||| | |||| ||||||||||||| Sbjct 1425 CTC-TGA------CGAG----------ACCGTCAGAGGC-CCCCTTATCCCGAAGTTACG 1466 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 | | ||||||||||||||| | |||| ||||||||||||||||| ||||||| Sbjct 1467 GGGGTAAATTGCCTAGTTCCTTCAACATGGTTCCCTCAAGCGCCTTGGTATACTCTACC 1525 >seq24946 Length=528 Score = 298 bits (330), Expect = 1e-78 Identities = 233/278 (84%), Gaps = 9/278 (3%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61 |||| ||| | |||||||||| | || ||||||||| | ||| | ||||||||||| Sbjct 186 GCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCCGAGCACATGTTGGAGACAGCG 245 Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 GGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 305 Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG 181 |||||||||||| |||||||||||||||||||||||||||||| ||||||| || Sbjct 306 TAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAGAGCTT-GC----- 359 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 ||||| | |||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 360 ---ACCCCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTG 416 Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 || || |||||| ||||||||||| ||||||||||| Sbjct 417 CGACTTCGCAGAGCCCTGTGTTTTTAGTAAACAGTCGC 454 >seq2809 Length=5502 Score = 264 bits (292), Expect = 3e-68 Identities = 310/420 (74%), Gaps = 27/420 (6%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | || ||||||||| |||||| | |||||||| Sbjct 3061 CGCGGGCACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGTTGATGTTGGAGACAAT 3002 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3001 GGGGAAGTCGTTACGCCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2942 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| || |||||||||||||||||| |||||||| |||| | | | Sbjct 2941 TTAGGACCGTCATAGTTACGGCCGCCGTTTACTGGGGCTTC-------AGCTCAGTGCTT 2889 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || ||| || | |||||||||| ||||||||||||||||| || ||||| | ||| Sbjct 2888 GCACACCTCACC--TTAACCTTCCAGCACCGGGCAGGCGTCAGGCCATATACTTTTTCTT 2831 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || |||||| || |||||||||| |||||||||||| | |||| ||| | | ||| Sbjct 2830 ACGAATTTGCATAGCCCTGTGTTTTTGATAAACAGTCGCCACCCCCTGCTATGTGCCACC 2771 Query 301 -GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | | || | | || ||| || | |||| |||||||||||| Sbjct 2770 TTACCTTAGTTGCCTAAGGAAGGCCAT----------------CCTTTTCCCGAAGTTAC 2727 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 || | |||| ||||||||||| | ||||||| | ||||||||||| ||||||| Sbjct 2726 GGATGCAATTTGTCTAGTTCCTTCAACATCATTCTCTCCA-CGCCTTGGTATACTCTACC 2668 >seq17492 Length=566 Score = 161 bits (178), Expect = 3e-37 Identities = 141/173 (82%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAG-C 60 |||| || | |||||||||| || | | ||||||||| ||| || ||||||| | Sbjct 365 GCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCGAGCATCTCTCCGAGACAGTC 424 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | | ||||||| | |||||||| |||||||||||||||||||||||||||||||||| Sbjct 425 GTCAAC-TCGTTACACGATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 483 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173 ||||||||||||| |||||||||| | || || ||||||| || | ||||||| Sbjct 484 TTAGGACCGTTATAGTTACGGCCGACATTCACGGGGGCTTAGACCCAGAGCTT 536 >seq32140 Length=457 Score = 104 bits (114), Expect = 6e-20 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||| ||| | ||||||||| ||||||| |||||||| Sbjct 110 CGCGGGTAGTGTGCATCTTGACACACAGTTCAATTTCGCTGAGTCCACATCAGAGACAGC 51 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 110 | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 GGGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260159400128