Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq21152 313 5e-83 seq43636 293 5e-77 seq24946 291 2e-76 seq35950 286 7e-75 seq2809 264 2e-68 seq20133 259 1e-66 seq5548 246 6e-63 seq22555 244 2e-62 seq17492 178 3e-42 seq32140 78.8 2e-12 >seq21152 Length=2898 Score = 313 bits (346), Expect = 5e-83 Identities = 292/368 (79%), Gaps = 16/368 (4%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| ||||| | || | ||||||| | || Sbjct 1142 TACCCCGCATCTTCACGGGGAATTCAATTTCGCCGAGCCCATGTTGGAGACAGCGGGGAA 1201 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1202 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1261 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | |||| || |||| || Sbjct 1262 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAGGC-----TTGC----AC 1312 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||| |||||||||||||||||| ||||||| ||| || || || Sbjct 1313 CTCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACTTCGCCTCACGGCT 1372 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-CTGTCA 299 ||||||| |||||||||||||||||||||||| |||| ||| ||| | ||| | Sbjct 1373 TAGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCCACCCCCTAGTCTGTGCCCCTCTGAC- 1431 Query 300 TAGACAGGCA-----CCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354 |||| | || |||||| |||| ||||||||||| | ||||| |||||||| | Sbjct 1432 GAGACCGTCAGAGGCCCCCTTATCCCGAAGTTACGGGGGTAAATTGCCTAGTTCCTTCAA 1491 Query 355 AATAGTTC 362 || |||| Sbjct 1492 CATGGTTC 1499 >seq43636 Length=858 Score = 293 bits (324), Expect = 5e-77 Identities = 293/377 (78%), Gaps = 26/377 (7%) Strand=Plus/Minus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| ||||| || | ||||||| | || Sbjct 516 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCGATGCTGGAGACAGCGGGGAAG 457 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 456 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 397 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||| ||||||| | |||| || |||| || Sbjct 396 CGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAGGC-----TTGC----ACC 346 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| ||||||||||| |||||||||||||||||| ||||||| ||| ||| || ||| Sbjct 345 TCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCTTACGGCTT 286 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGC-----------TTGGGCCTATTCTCTGC 290 ||||| |||||||||||| ||||||||||| ||| ||| | | | | Sbjct 285 CGCAGAGCCCTGTGTTTTTGATAAACAGTCGCCACCCCCTGTTTTGTGCCCCTCCCCCAC 226 Query 291 G---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347 | ||| | | || |||| | |||| |||| ||||||||| | || |||||||||| Sbjct 225 GGTTGCCCG-CGGAG-GAGGC-CTCCTTATCCCGAAGTTACGGAGGCAAATTGCCGAGTT 169 Query 348 CCTTAACAATAGTTCTC 364 |||| | || |||||| Sbjct 168 CCTTCAGCATCGTTCTC 152 >seq24946 Length=528 Score = 291 bits (322), Expect = 2e-76 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| ||||| || | ||||||| | || Sbjct 191 TACCCCGCATCTTCACGGGGAATTCAATTTCGCCGAGCACATGTTGGAGACAGCGGGGAA 250 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 251 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 310 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| |||| || |||| || Sbjct 311 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAGAGC-----TTGC----AC 361 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct 362 CCCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACT 421 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| ||||||||||||| Sbjct 422 TCGCAGAGCCCTGTGTTTTTAGTAAACAGTCGCT 455 >seq35950 Length=2181 Score = 286 bits (316), Expect = 7e-75 Identities = 276/356 (78%), Gaps = 20/356 (6%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | | ||||||||| |||||| Sbjct 497 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGTGTGGCCATCGTT 556 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 557 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 616 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||| ||||||| | |||| || |||| || ||| Sbjct 617 TAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAGGC-----TTGC----ACCTCTCC 667 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 ||||||||||| |||||||||||||||||| ||||||| ||| ||| || ||| |||| Sbjct 668 TCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCTTACGGCTTCGCAG 727 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG---------- 296 | |||||||||| |||||||||||||| |||| ||| ||| |||| Sbjct 728 AGCCCTGTGTTTTAGGTAAACAGTCGCTACCCCCTAGTCTGTGCCCCCTGATGCTGGTTG 787 Query 297 -TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || |||| | ||||||||| ||||||||| | || ||||||||||||||| Sbjct 788 CCCAACACCAGGGCCTCCTTCTCCCGAAGTTACGGAGGCAATTTGCCGAGTTCCTT 843 >seq2809 Length=5502 Score = 264 bits (292), Expect = 2e-68 Identities = 219/267 (82%), Gaps = 9/267 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||| | |||| || | |||||| || || ||||| Sbjct 3049 GCATCTTCACGGAGAATTCAATTTCGCTGAGTTGATGTTGGAGACAATGGGGAAGTCGTT 2990 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2989 ACGCCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 2930 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||||||| || ||| ||| |||| ||| || Sbjct 2929 TAGTTACGGCCGCCGTTTACTGGGGCTTCAGCTCAGTGC-----TTGC----ACACCTCA 2879 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 ||||||||||||||||||||||||||||||| | ||||| | |||| ||| || ||| Sbjct 2878 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGGCCATATACTTTTTCTTACGAATTTGCAT 2819 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||||||||||| ||||||||||| Sbjct 2818 AGCCCTGTGTTTTTGATAAACAGTCGC 2792 >seq20133 Length=1753 Score = 259 bits (286), Expect = 1e-66 Identities = 288/385 (75%), Gaps = 37/385 (10%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| ||| ||| ||| | |||||| | ||||||||| |||||| Sbjct 1364 GCATCTTCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTGTGGCCATCGTT 1423 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1424 ACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 1483 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| | | | || |||| | | || | Sbjct 1484 TAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGC-----TTGC---ACCCCAT-C 1534 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCC-TATACATCGTCTTGCGACTTAGCA 245 |||| ||||||||||||||||||||||| |||| ||||| || ||| || || ||| Sbjct 1535 ATTTAATCTTCCAGCACCGGGCAGGCGTCA-CTCCGTATACGTCCACTTTCGTGTTGGCA 1593 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT---------- 295 | | ||||||||||| ||||||||||| ||||||||||||| ||| Sbjct 1594 CAGAGCTGTGTTTTTGTTAAACAGTCGCAGCCACCTATTCTCTGCGACCTCTATCAGCTT 1653 Query 296 ----------GTCATAGAC------AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTT 339 ||| || || |||||| ||||||||| ||||||||| |||| ||| Sbjct 1654 CGGACGCGAAGTCCTACACCGACAGAGGCACACCTTCTCCCGAAGTTACGGTGTCAATTT 1713 Query 340 GCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||| | ||||||| Sbjct 1714 GCCGAGTTCCTTCTCCTGAGTTCTC 1738 >seq5548 Length=810 Score = 246 bits (272), Expect = 6e-63 Identities = 229/289 (79%), Gaps = 9/289 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | | ||||||||| |||||| Sbjct 314 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGTGTGGCCATCGTT 255 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 254 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 195 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| ||| | || |||| | | || | Sbjct 194 TAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGC-----TTGC---ACCCCAT-C 144 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||||||||||||||||||| ||||||| ||| ||| || ||| |||| Sbjct 143 ATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTTTCGTCTTTGCAG 84 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 | |||||||||| ||||||||||| || |||||||||||||| Sbjct 83 AGTGCTGTGTTTTTAATAAACAGTCGCAGCCACCGATTCTCTGCGGCCT 35 >seq22555 Length=2992 Score = 244 bits (270), Expect = 2e-62 Identities = 218/271 (80%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAAT 62 |||||||||||||| ||| ||||||||| |||||| | ||||||| || || || Sbjct 601 CGGCATCTTCACCGCAATTTCAATTTCACTGAGTCTCGGCTGGAGACAGCCTGGCC--AT 658 Query 63 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 122 | |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 659 CATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 718 Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAG 182 |||||||||||||||||||||||| ||||||| | | |||||| |||| ||||| Sbjct 719 GTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCTTGCGCTAACCC 778 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||||||||| |||||||||||| |||| | ||||| || |||| ||| || Sbjct 779 CATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCCTCTTACGAGTTT 838 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 ||| | |||||||||| |||||||| || Sbjct 839 GCACAGTGCTGTGTTTTTAATAAACAGTTGC 869 >seq17492 Length=566 Score = 178 bits (196), Expect = 3e-42 Identities = 130/151 (86%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| | | |||||||| ||| ||| Sbjct 374 CGGCATCTTCACCGCCACTACAATTTCACCGAGCATCTCTCCGAGACAGTCGTCAACTCG 433 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 TTACACGATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 493 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTA 155 |||||||||||||| | || || |||||||| Sbjct 494 TATAGTTACGGCCGACATTCACGGGGGCTTA 524 >seq32140 Length=457 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | ||||||| | ||||| | ||||||| | | |||||| Sbjct 98 GCATCTTGACACACAGTTCAATTTCGCTGAGTCCACATCAGAGACAGCGGGGAGATCGTT 39 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAA 104 ||||| ||||||| |||||||||||||||||||||||| Sbjct 38 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061860205184