Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq25966 517 3e-144 seq5550 475 1e-131 seq36788 455 1e-125 seq5849 423 6e-116 seq42319 421 2e-115 seq13716 255 2e-65 seq38752 203 1e-49 >seq25966 Length=3938 Score = 517 bits (572), Expect = 3e-144 Identities = 412/496 (83%), Gaps = 0/496 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct 1081 TACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGATGAT 1140 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||| ||||||||| |||||||||||||||||||| ||||||||| | || | | Sbjct 1141 GTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGCTCTTGACATGTACGGAACTTGC 1200 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| | | ||| ||| | | ||||||| ||||||| ||||||||| Sbjct 1201 CAGAGATGGCTTGGTGCCCGAAAGGGAGCCGTAACACAGGTGCTGCATGGCTGTCGTCAG 1260 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1261 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGC 1320 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1321 CATCATTTAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1380 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| || ||||| ||||||||| ||||| ||||||| |||||||| | ||| Sbjct 1381 GACGTCAAGTCCTCATGGCCCTTATGAGCAGGGCTTCACACGTCATACAATGGTCGGTAC 1440 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | |||| || |||||||||||| ||| |||| | ||||| | || ||| ||||||| Sbjct 1441 AGAGGGTTGCCAAACCGCGAGGTGGAGCTAATCTCTTAAAGCCGATCGTAGTCCGGATTG 1500 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 |||||||||||||||| |||||| ||||||||||||||||| || ||||||| || | Sbjct 1501 GAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGC 1560 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1561 GGTGAATACGTTCCCG 1576 >seq5550 Length=2568 Score = 475 bits (526), Expect = 1e-131 Identities = 404/496 (81%), Gaps = 5/496 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1690 TACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1631 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||| ||||||||| | |||||||| | || ||| Sbjct 1630 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATGCCAGGAATCCTG 1571 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| || | | | | | || | ||||||| ||||||| |||||||| Sbjct 1570 CAGAGATGTGGGAGTGCTCGAAAGAGAACCTGGACACAGGTGCTGCATGGCCGTCGTCAG 1511 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1510 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGC 1451 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 | | ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1450 TACGA--AAG---GGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1396 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 ||||||| |||||||| |||||||| | ||||||||||||| |||||||| | || Sbjct 1395 GACGTCAGGTCATCATGGCCCTTATGGGTAGGGCTACACACGTCATACAATGGCCGGGAC 1336 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | ||||| || || |||||||| ||| ||||||| ||| | || ||| ||||| | Sbjct 1335 AGAGGGCTGCCAACCCGCGAGGGGGAGCTAATCCCAGAAACCCGGTCGTAGTCCGGATCG 1276 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 ||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||| | Sbjct 1275 TAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCTTGCCGC 1216 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1215 GGTGAATACGTTCCCG 1200 >seq36788 Length=1761 Score = 455 bits (504), Expect = 1e-125 Identities = 403/498 (81%), Gaps = 4/498 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1233 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1174 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCT- 119 ||||||||||||||||||||||| |||||||||||| ||||||||| ||| | Sbjct 1173 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCTCTTGACATGGCAGGACGGTTT 1114 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 | |||| || | | |||||| | | | ||||||| ||||||| |||||||| Sbjct 1113 CCGGAGACGGACTCCTTCACTTCGGTGACCTGCAC-ACAGGTGCTGCATGGCTGTCGTCA 1055 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1054 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCTCTAGTTG 995 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGGG 298 ||| ||||||||||||||||||| |||||||||||| || ||| ||||||||||||| Sbjct 994 CCAGCATTAAGTTGGGCACTCTAGAGGGACTGCCGGTGATAAGCCGAGAGGAAGGTGGGG 935 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| |||||| | |||||||||||||||||||||||| Sbjct 934 ATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGCGGTG 875 Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 ||| ||| ||||| |||| ||| ||||| ||| | || |||||||||| Sbjct 874 ACAGTGGGATGCGAAGGGGCGACCCGGAGCCGATCCCCAAAAACCG-TCCCAGTTCGGAT 816 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCT 478 || | |||||||||||| | |||||| |||||||||||||||||| ||||||||||| Sbjct 815 TGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCC 756 Query 479 ACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 755 GCGGTGAATACGTTCCCG 738 >seq5849 Length=3646 Score = 423 bits (468), Expect = 6e-116 Identities = 399/503 (79%), Gaps = 13/503 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||| ||||||||||||| ||||||||||||||| ||| Sbjct 2852 TACGGTCGCAAGATTAAAACTCAAAGAAATTGACGGGGACTCGCACAAGCGGTGGAACAT 2911 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| || ||||||| |||||||||| |||||||| | || | Sbjct 2912 GTGGTTTAATTCGATGCTACGCGAAAAACCTTACCAGGCCTTGACATGGT--GATCATAT 2969 Query 121 TA----GAGATAGAGGTTTCCCCTTCGGGGGA-CAGAGTGACAGGTGATGCATGGTTGTC 175 || |||| | | || || | ||| || | ||||||| ||||||| |||| Sbjct 2970 TATGGGGAGACTCATGAATCGGTTTGGCCGGATCA---TCACAGGTGTTGCATGGCTGTC 3026 Query 176 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTA 235 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 3027 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTATCCTTA 3086 Query 236 GTTGCCATC--ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGG 293 ||| ||| | | | | |||||||||||| ||||||||||| || ||||||||||| Sbjct 3087 GTTACCAGCGGGTAATGCCGGGCACTCTAAGGAAACTGCCGGTGATAAGCCGGAGGAAGG 3146 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| |||||||| ||| |||| |||||| | ||||||||||||||| |||||||| Sbjct 3147 TGGGGATGACGTCAAGTCAGCATGGCCCTTACGGCCTGGGCTACACACGTGTTACAATGG 3206 Query 354 ACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 |||| ||| || | | | || | ||||||| ||||||| |||||||| Sbjct 3207 CGGTGACAATGGGGTGCAATAGGGTGACCTGGAGCAAAT-CCATAAAAGCCGTCTCAGTT 3265 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 ||||||||| |||||||||| || |||||| ||||||||||||||||| |||||||| Sbjct 3266 CGGATTGTACCCTGCAACTCGGGTACATGAAGTCGGAATCGCTAGTAATCGCAGATCAGC 3325 Query 474 ATGCTACGGTGAATACGTTCCCG 496 ||||| |||||||||||||| || Sbjct 3326 ATGCTGCGGTGAATACGTTCTCG 3348 >seq42319 Length=3671 Score = 421 bits (466), Expect = 2e-115 Identities = 393/498 (79%), Gaps = 26/498 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 812 TACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 871 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119 ||||||||||||||||||||||| ||||||||||||| |||||||| | | | Sbjct 872 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAACCCTTGACATGGGTATCGCGGGA 931 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGG-GGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | |||||| | |||| ||||| ||| | ||||||| ||||||| ||||||| Sbjct 932 CCAGAGATGGTCCTTTCAG-TTCGGCTGGATACCAC-ACAGGTGCTGCATGGCTGTCGTC 989 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||| Sbjct 990 AGCTCGTGTCGTGAGATGTTCGGTTAAGTCCGGCAACGAGCGCAACCCACACTCTTAGTT 1049 Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 |||| |||| |||||||||||||| | ||||||| ||| || |||||||||||| || Sbjct 1050 GCCAGCATTCAGTTGGGCACTCTAGGAGAACTGCCGATGATAAGTCGGAGGAAGGTGTGG 1109 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| |||||| | ||||||||||||||||||||||||| Sbjct 1110 ATGACGTCAAGTCCTCATGGCCCTTACGGGTTGGGCTACACACGTGCTACAATGGTGGTG 1169 Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 |||| || || ||||||| |||| ||||||||||||| Sbjct 1170 ACAATGG---------------------GCCAATCCCAAAAAG-CCATCTCAGTTCGGAT 1207 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCT 478 || |||||||||||||| |||||| ||||||||||||||||| | ||||||| Sbjct 1208 TGGGGTCTGCAACTCGACCCCATGAAGTCGGAATCGCTAGTAATCGCGTAACAGCATGAC 1267 Query 479 ACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 1268 GCGGTGAATACGTTCCCG 1285 >seq13716 Length=566 Score = 255 bits (282), Expect = 2e-65 Identities = 213/257 (83%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 255 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 196 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGAC-CCCT 119 ||||||||||||||||||||||| |||||||||||| ||||||||| ||| | Sbjct 195 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCTCTTGACATGGCAGGACGGTTT 136 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 | |||| || | | |||| || ||| ||||||| ||||||| |||||||| Sbjct 135 CCGGAGACGGATCCCTTCACTTC-GGTGACCTGCACACAGGTGCTGCATGGCTGTCGTCA 77 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 76 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCTCTAGTTG 17 Query 240 CCATCATTAAGTTGGGC 256 ||| ||||||||||||| Sbjct 16 CCA-CATTAAGTTGGGC 1 >seq38752 Length=1498 Score = 203 bits (224), Expect = 1e-49 Identities = 174/215 (81%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282 ACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACAC 341 |||||||||||||||||| |||||||| || ||||| ||||||| | ||||||||||| Sbjct 1498 ACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATAGGTGGGGCTACACAC 1439 Query 342 GTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAG 401 || |||||||| ||||||||| || || |||||||| ||| ||||||||||| Sbjct 1438 GTCATACAATGGCTGGTACAAAGGGTTGCCAACCCGCGAGGGGGAGCTAATCCCATAAAA 1379 Query 402 TTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAA 461 || ||| ||||| | |||||||||||||||| ||||| |||||||||||||| Sbjct 1378 CCAGTCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAA 1319 Query 462 TCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 |||| |||||| ||| |||||||||||||||||| Sbjct 1318 TCGTGGATCAGAATGTCACGGTGAATACGTTCCCG 1284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503235832640