Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq5548 194 3e-47 seq22555 190 4e-46 seq20133 183 6e-44 seq2809 178 3e-42 seq35950 168 1e-39 seq21152 165 2e-38 seq32140 127 4e-27 seq43636 114 3e-23 seq17492 82.4 1e-13 >seq5548 Length=810 Score = 194 bits (214), Expect = 3e-47 Identities = 232/311 (75%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88 |||| ||| | | |||||| |||| |||| |||| || ||| || || ||||||| Sbjct 420 ACGCTAGTTTCTATGGAGCCAACGTTGAAATACCACCC-TGGTGTGTTTGAGGTTCTAAC 478 Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148 | ||| || ||| |||||||||| | |||||||||||||||||||||| Sbjct 479 CTTGTCCCGT-TATCCGGGATGGGGACAGTGTATGGTGGGCAGTTTGACTGGGGCGGTCT 537 Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208 |||||||||| |||||||||| | | ||| ||| || | || ||||| | || Sbjct 538 CCTCCCAAAGTGTAACGGAGGAGTTCGAAGGTACGCTAAATACGGTCGGAAATCGTGTTG 597 Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268 | |||||| |||| ||| ||| |||||||||| || |||||| |||||| ||||||| Sbjct 598 ATAGTGCATTGGCATAAGCGTGCTTGACTGCGAGACTGACAAGTCGAGCAGGTACGAAAG 657 Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328 | || | | |||||||| ||| ||| |||||| |||| |||||| ||||||||||| || Sbjct 658 TAGGACAAAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTA 717 Query 329 CCCTGGGGATA 339 | ||||||||| Sbjct 718 CTCTGGGGATA 728 >seq22555 Length=2992 Score = 190 bits (210), Expect = 4e-46 Identities = 237/319 (74%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 25 TGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TT 83 |||| |||||||| |||| ||||||| ||| |||| |||| ||| | || ||| || Sbjct 502 TGGAGACGCCAGTCTTCATGGAGCCGTCCTTGAAATACCACCCTTGTA-TGTTTGATGTT 444 Query 84 CTAACCGGACGACGTATAACCG---TTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGG 140 ||||| | | | | || || ||| |||||||| | | ||| ||||||||||| Sbjct 443 CTAAC-GTAGGTCCCTGAATCGGGATTGC--GGACAGTGCCTGGTGGGTAGTTTGACTGG 387 Query 141 GGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAA 200 ||||||| ||||| ||||||||||||||| || | ||| | || || || ||| | Sbjct 386 GGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAAGTACGGTCGGACA 327 Query 201 CCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGG 260 | | || |||||||||||| ||| | || ||||||| || || ||| |||||| Sbjct 326 TCGTACGGTTAGTGCAAAGGCAGAAGCCAGCTTAACTGCGAGACAGACACGTCGAGCAGG 267 Query 261 GACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGAT 320 |||||||| || |||| |||||||| ||| ||| |||||| |||| |||||| |||||| Sbjct 266 TACGAAAGTAGGTCTTAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGAT 207 Query 321 AAAAGCTACCCTGGGGATA 339 ||||| ||| | ||||||| Sbjct 206 AAAAGGTACTCCGGGGATA 188 >seq20133 Length=1753 Score = 183 bits (202), Expect = 6e-44 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | ||||||||||||||||||||| |||||||||| |||||||||| Sbjct 1178 GGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAGTGTAACGGAGGA 1119 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | | ||| | ||| | || ||||| | ||| | ||||||| ||||||||| | Sbjct 1118 GTTCGAAGGTTACCTAGGTACGGTCGGAAATCGTGCTGATAGTGCAATGGCAAAAGGTAG 1059 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 || ||||||| ||| |||||| |||||| |||||| || | || |||||||| ||| Sbjct 1058 CTTAACTGCGAGACCGACAAGTCGAGCAGGTGCGAAAGCAGGACATAGTGATCCGGTGGT 999 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 998 TCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 950 >seq2809 Length=5502 Score = 178 bits (196), Expect = 3e-42 Identities = 169/215 (79%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||||||||||||||||||| ||||||||||| | ||| || || Sbjct 3250 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGCATAACGGAGGCGTGCGAAGGTAAGCT 3309 Query 186 CAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 ||| |||| ||||| || | | ||||||| |||| ||| || ||||||||| || Sbjct 3310 CAGGTTGGTCGGAAATCAACTGTAAGAGTGCAATGGCATAAGCTTGCCTGACTGCGAGAC 3369 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 |||||| ||||| |||||||||||| | || ||||| || ||| ||| ||||| || Sbjct 3370 TGACAAGTCGAGCAGAGACGAAAGTCGGTCATAGTGATCTGGTGGTTCTGTGTGGAAGGG 3429 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || || ||| ||||||||||| ||| | ||||||| Sbjct 3430 CCATCACTCAACGGATAAAAGGTACTCCGGGGATA 3464 >seq35950 Length=2181 Score = 168 bits (186), Expect = 1e-39 Identities = 177/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | ||||||||||||||||||||| |||||||||| |||||||||| Sbjct 311 GGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAGCGTAACGGAGGA 252 Query 171 GCCCAAAGATACCCTCAGCTTGGAT-GGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229 | | ||| ||| || || | | | ||| | | || | ||||||| |||| ||| || Sbjct 251 GTTCGAAGGTACGCT-AGTTACGGTCGGACATCGTGACGATAGTGCAATGGCATAAGCGT 193 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | || ||||||| || |||||| ||||| |||||| || | || |||||||| || Sbjct 192 GCTTAACTGCGAGACTGACAAGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGTGG 133 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||| |||||| |||| |||||| ||||||||||| ||| ||||||||| Sbjct 132 TTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 83 >seq21152 Length=2898 Score = 165 bits (182), Expect = 2e-38 Identities = 165/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||||||||||||||||||||||||||||||||| | | | | || Sbjct 947 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGATGGTGGGCT 888 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| || ||||| | || ||||||| |||| ||| | ||||||||| || Sbjct 887 CAGGCCGGTCGGAAATCGGCTGCTGAGTGCAATGGCACAAGCCCGCCTGACTGCGAGACT 828 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| |||||||||||||||||| | || |||||||| ||| | | || ||| Sbjct 827 GACAAGTCGAGCAGGGACGAAAGTCGGCCATAGTGATCCGGTGGTTCCGCGTGAGTGGGC 768 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||||| ||| | ||||||| Sbjct 767 CATCGCTCAACGGATAAAAGGTACGCCGGGGATA 734 >seq32140 Length=457 Score = 127 bits (140), Expect = 4e-27 Identities = 184/256 (72%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCT-GTTGTATTGGATTTCTAAC 88 |||||||| | | |||||| | ||| ||||| |||| | | | ||| || |||||| Sbjct 204 ACGCCAGTCTCCGTGGAGCCTCCCTTGAGATACCACCCTTCGCACTCTTG-ATGTCTAAC 262 Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148 || ||| || ||| |||||| || | ||| ||||||||||||||||||| Sbjct 263 CGCGGCCCGT-TATCCGGGTCCGGGACCCTGCGTGGTGGGTAGTTTGACTGGGGCGGTCG 321 Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208 ||||||||| |||||||||||||| | ||| | ||||| || ||||| | || Sbjct 322 CCTCCCAAACAGTAACGGAGGCGCGCGAAGGTTGGCTCAGAGCGGTCGGAAATCGCTCGT 381 Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268 ||||||| |||| ||| | ||||||| | || |||||| ||||| |||||||| Sbjct 382 TGAGTGCAATGGCAGAAGCCAGCCTGACTGCAAGACTGACAAGTCGAGCAGAGACGAAAG 441 Query 269 TCGGGCTTAATGATCC 284 |||| | || |||||| Sbjct 442 TCGGCCATAGTGATCC 457 >seq43636 Length=858 Score = 114 bits (126), Expect = 3e-23 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||||||| | ||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 698 GGACAGTGCATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGGCG 757 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | | | | | ||||| || ||||| | || ||||||| |||| ||| | Sbjct 758 CGCGATGGTGGGCTCAGACCGGTCGGAAATCGGTCGTCGAGTGCAATGGCATAAGCCCGC 817 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGG 272 ||||||||| || |||||| ||||| |||||||||||| Sbjct 818 CTGACTGCGAGACTGACAAGTCGAGCAGAGACGAAAGTCGG 858 >seq17492 Length=566 Score = 82.4 bits (90), Expect = 1e-13 Identities = 135/190 (71%), Gaps = 5/190 (3%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| || || |||||| ||||||||| ||||||||||||||||||||| Sbjct 189 GGGACAGTGATAGCAGGTCAGTTTTTCTGGGGCGGAATCCTCCCAAAGAGTAACGGAGGA 130 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC-GCACAGTGCAAAGGCAAAAGGGT 229 | ||| | ||||| || || || || | || | || ||| | | ||||| Sbjct 129 TTACGAAGGTTCCCTCGGCCCGGTCGGTAATCGGGCTATAGAGCGCATGAGTATAAGGGA 70 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAA-TGATCCGGCG 288 | || |||| || ||| |||||| ||||| |||||| | || | || |||||||| | Sbjct 69 GCTTTACTGTGAGACCAACAAGTCGAGCAGTTGCGAAAG-CAGGTTCAAGTGATCCGGTG 11 Query 289 GTGCTGAATG 298 || |||||| Sbjct 10 GT--TGAATG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981900852384