Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq22555 156 5e-36 seq24946 140 4e-31 seq21152 140 4e-31 seq17492 140 4e-31 seq2809 136 4e-30 seq43636 134 2e-29 seq20133 120 3e-25 seq35950 114 1e-23 seq5548 114 1e-23 seq32140 93.3 5e-17 >seq22555 Length=2992 Score = 156 bits (172), Expect = 5e-36 Identities = 125/152 (82%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| |||||||||||||| | | ||||||||||| Sbjct 572 CGGGGTCTTTCCGTCTAGCCGCGGGTATACGGCATCTTCACCGCAATTTCAATTTCACTG 631 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||||||||||||||||||||||||||||| Sbjct 632 AG-TCTCGGCTGGAGACAGCCTGGCCATCATTACACCATTCGTGCAGGTCGGAACTTACC 690 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 691 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 722 >seq24946 Length=528 Score = 140 bits (154), Expect = 4e-31 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||||||| | |||||||||| | | | ||||||| | | Sbjct 166 CGGGGTCTTTCCGTCTAACTGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCCG 225 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| || | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 226 AGCACATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 285 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 286 GACAAGGAATTTCGCTACCTTAGGACCGTTA 316 >seq21152 Length=2898 Score = 140 bits (154), Expect = 4e-31 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||||||| | |||||||||| | | | ||||||| | | Sbjct 1117 CGGGGTCTTTCCGTCTAACTGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCCG 1176 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| || | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 1177 AGCCCATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1236 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 1237 GACAAGGAATTTCGCTACCTTAGGACCGTTA 1267 >seq17492 Length=566 Score = 140 bits (154), Expect = 4e-31 Identities = 120/150 (80%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||||| ||||||| |||||||||||||| ||||||||||||| ||| Sbjct 347 GGGTCTTTCCGTCCTGCTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCGAG 406 Query 85 C-TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | || | ||||||| ||||| |||||||| |||||||||||||||| Sbjct 407 CATCTCTCC-GAGACAGTCGTCAACTCGTTACACGATTCGTGCGGGTCGGAACTTACCCG 465 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 466 ACAAGGAATTTCGCTACCTTAGGACCGTTA 495 >seq2809 Length=5502 Score = 136 bits (150), Expect = 4e-30 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||| | || |||||||||| || | | ||||||| ||| Sbjct 3080 CGGGGTCTTTCCGTCTAACCGCGGGCACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 3021 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | | |||||| ||| |||||| ||||||||||||||||||| Sbjct 3020 AGTTGATGTTGGAGACAATGGGGAAGTCGTTACGCCATTCATGCAGGTCGGAACTTACCC 2961 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 2960 GACAAGGAATTTCGCTACCTTAGGACCGTCATAGTTACGGCCGCCGTTTACTGGGGCTTC 2901 >seq43636 Length=858 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | | |||||||||| | | | ||||||||||| Sbjct 542 CGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 483 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 482 AGTCGATGCTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 423 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 422 GACAAGGAATTTCGCTACCTTAGGACCGTTA 392 >seq20133 Length=1753 Score = 120 bits (132), Expect = 3e-25 Identities = 117/152 (77%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||||||| |||||||||| | | | ||| ||| ||| Sbjct 1333 CGGGGTCTTTCCGTCTAGCAGCGGGTAGATTGCATCTTCACAAACATTTCAACTTCGCTG 1392 Query 83 AG-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || |||| || ||||||| ||| |||||||||| |||||||||||||| Sbjct 1393 AGTCTCA-GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCGGGTCGGAACTTACC 1451 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 1452 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 1483 >seq35950 Length=2181 Score = 114 bits (126), Expect = 1e-23 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||| | ||||| |||| | | | ||| ||| |||| Sbjct 467 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 526 Query 84 GCTCAC-GGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | || ||||||| ||| |||||||||||||||||||||||||| Sbjct 527 G-TCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 585 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 586 GACAAGGAATTTCGCTACCTTAGGACCGTTA 616 >seq5548 Length=810 Score = 114 bits (126), Expect = 1e-23 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||| | ||||| |||| | | | ||| ||| |||| Sbjct 344 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 285 Query 84 GCTCAC-GGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | || ||||||| ||| |||||||||||||||||||||||||| Sbjct 284 G-TCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 226 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 225 GACAAGGAATTTCGCTACCTTAGGACCGTTA 195 >seq32140 Length=457 Score = 93.3 bits (102), Expect = 5e-17 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| | |||||||| | ||||||| || | | | ||||||| |||| Sbjct 128 GGGGTCTTTCCGTCTAACCGCGGGTAGTGTGCATCTTGACACACAGTTCAATTTCGCTGA 69 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | ||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 68 GTCCACATCAGAGACAGCGGGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 9 Query 144 ACAAGGAA 151 |||||||| Sbjct 8 ACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546930661491