Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq5841 426 3e-117 seq25966 378 2e-102 seq47862 333 6e-89 seq5550 313 5e-83 seq33506 300 3e-79 seq5849 289 6e-76 seq5840 289 6e-76 seq42319 244 2e-62 seq36788 136 8e-30 >seq5841 Length=1512 Score = 426 bits (472), Expect = 3e-117 Identities = 297/335 (89%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1030 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 973 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 972 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 913 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 912 TGTGGCTGATCATCCTCTCAAACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTCA 853 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||||| || ||||| |||| |||||| |||||||||||||| ||| Sbjct 852 CCAACTAGCTAATCCCACGTAGGCACATCCGATAGCATGTGGCCCGAAGGTCCCACACTT 793 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | |||||| |||||||||||| | ||||||| | | |||||||| ||| | | Sbjct 792 TGGTCCGTAGACATTATGCGGTATTAACAGTCGTTTCCAACTGGTATCCCCCTCTATCGG 733 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | || |||||| ||||||||||||||||||||||| Sbjct 732 GTAGCTTCCTACGCATTACTCACCCGTCCGCCGCT 698 >seq25966 Length=3938 Score = 378 bits (418), Expect = 2e-102 Identities = 287/336 (85%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||||| Sbjct 624 CTTTACAACCCGAAGGCCTTCTT-CAGACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 567 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 566 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 507 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||||||||||||||| | ||| ||||||||||| |||||||| |||||||| Sbjct 506 TGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGCCTAGGTGAGCCTTTACCTCA 447 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 || ||||||||||| ||| | ||| || |||||| |||||||||||||||| ||| Sbjct 446 CCTACTAGCTAATCAGACGTCGGCCGCTCGAATAGCGTGAGGCCCGAAGGTCCCCCACTT 387 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 ||| || || ||||||||||||||||| |||| |||||||||||||||| | Sbjct 386 TCTACCTCAGTACGTATGCGGTATTAGCACAACTTTCGCTGCGTTATCCCCCACTACTCG 327 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| |||| | ||||||||||||||| |||| ||| Sbjct 326 GCACGTTCCGACGCATTACTCACCCGTTCGCCACTC 291 >seq47862 Length=579 Score = 333 bits (368), Expect = 6e-89 Identities = 279/337 (83%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||||| Sbjct 422 CTTTACAACCCGAAGGCCTTCTT-CAGACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 365 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 364 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 305 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| || |||||||||||||| ||| |||||| | ||||||| ||| ||||| || Sbjct 304 TGTGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCCTTTACCCCA 245 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||| |||||| || | ||| || || |||| ||| | | ||||| |||| Sbjct 244 CCAACTACCTAATCTGATATCGGCCGCTCCAATTGCGCGAGGTCTTGCGATCCCCCGCTT 185 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAAC-GTTATCCCCCACTACCA 299 || ||| ||| |||||||||||||||| | |||| || | |||||||||||| || Sbjct 184 TCACCCTCAGGTCGTATGCGGTATTAGCTGCTCTTTC-GAGCAGTTATCCCCCACAACTG 126 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 |||| |||| | |||||||||||||| |||| ||| Sbjct 125 GGCACGTTCCGATACATTACTCACCCGTTCGCCACTC 89 >seq5550 Length=2568 Score = 313 bits (346), Expect = 5e-83 Identities = 274/336 (82%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||||| | | |||||||||| ||||||||||| ||| || ||| Sbjct 2148 TTTACAACCCGAAGGCCTTCTTCC-CGCACGCGGCAT-GGCTGGATCAGACTTGCGTCCA 2205 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 2206 TTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 2265 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||| || |||||||||||||| ||| |||||| | ||||||| ||| ||||| ||| Sbjct 2266 GTGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCCTTTACCCCAC 2325 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 |||||| |||||| || | ||| || || |||| ||| | | ||||| ||||| Sbjct 2326 CAACTACCTAATCTGATATCGGCCGCTCCAATTGCGCGAGGTCTTGCGATCCCCCGCTTT 2385 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAAC-GTTATCCCCCACTACCAG 300 | ||| ||| |||||||||||||||| | | || ||| | |||||||||||| || | Sbjct 2386 CACCCTCAGGTCGTATGCGGTATTAGC-TGCTCTTTCGAGCAGTTATCCCCCACAACTGG 2444 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| |||| | |||||||||||||| |||| ||| Sbjct 2445 GCACGTTCCGATACATTACTCACCCGTTCGCCACTC 2480 >seq33506 Length=1068 Score = 300 bits (332), Expect = 3e-79 Identities = 269/336 (80%), Gaps = 16/336 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||| | ||| |||||||||| |||||||||||| || | ||| Sbjct 948 CTTTACAACCCGAAGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGGTTGCCCCC 891 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 890 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 831 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 830 TGTGGCTGATCGTCCTCTCAGACCAGCTAACGATCGTCGCCTTGGTGAGCCATTACCTCA 771 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || | ||||||| | ||| | || ||| Sbjct 770 CCAACTAGCTAATCGTACGCGGACTCATCTTTTGGCGATA------AA--------TCTT 725 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | |||||||||| || |||||||||| | |||||| ||||| || || | || Sbjct 724 TATCCCGTAGGAACCATCCGGTATTAGCTCCAGTTTCCCGGAGTTATTCCGAACCAAAAG 665 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 |||||| | | || |||||||||||| |||| ||| Sbjct 664 GCAGATATCCACGCGTTACTCACCCGTGCGCCACTC 629 >seq5849 Length=3646 Score = 289 bits (320), Expect = 6e-76 Identities = 268/335 (80%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||| | ||| |||||||| | | ||||||||||||| ||||| Sbjct 2422 CTTTACAACCCGAAGGCCTTCAT-CACTCACGCGGCGTCG-CTGGATCAGGCTTGCGCCC 2365 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2364 ATTGTCCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 2305 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||||| |||||||| ||| |||||||| Sbjct 2304 TGTGGCTGATCATCCTCTCAGACCAGCTAAAGATCGTTGCCTTGGTAAGCTTTTACCTCA 2245 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| | | |||||||| ||| |||| || ||| Sbjct 2244 CCAACTAGCTAATCTTGCATGGGCTCATC-CTTAG-GCAA-----TAA-------ATCTT 2199 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | || | || |||||||||||||| ||||||| | |||||||||||| | Sbjct 2198 TGACCTCTCGGCATTATGCGGTATTAGCAGTCGTTTCCAACTGTTATCCCCCACCTAAGG 2139 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||||||| | | |||||||||||||| ||| || Sbjct 2138 GCAGATTCCCATGTATTACTCACCCGTCTGCCACT 2104 >seq5840 Length=1738 Score = 289 bits (320), Expect = 6e-76 Identities = 266/335 (79%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||| | | |||||||||| |||||||||||||||||||||| Sbjct 1458 TTTACAACCCGAAGGCCTTCATCCTG-CACGCGGCAT-GGCTGGATCAGGCTTTCGCCCA 1401 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 1400 TTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1341 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||| || |||||||||||||| ||| |||||||||||||||| ||||||||| ||| Sbjct 1340 GTGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTCGCCTTGGTGGGCCATTACCCCAC 1281 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||||||||||| || | ||||||| | ||| | || |||| Sbjct 1280 CAACTAGCTAATCGTACGCGGACTCATCTTTTGGCGATA------AA--------TCTTT 1235 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGG 301 |||||||||| || |||||||||| | |||||| ||||| || || | ||| Sbjct 1234 ATCCCGTAGGAACCATCCGGTATTAGCTCCAGTTTCCCGGAGTTATTCCGAACCAAAAGG 1175 Query 302 CAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||||| | | || |||||||||||| |||| ||| Sbjct 1174 CAGATATCCACGCGTTACTCACCCGTGCGCCACTC 1140 >seq42319 Length=3671 Score = 244 bits (270), Expect = 2e-62 Identities = 256/335 (76%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||| | | | |||||||||| |||| |||||||||| ||||| Sbjct 380 CTTTACAACCCTAAGGCCTTCAT-CGCTCACGCGGCAT-GGCTAGATCAGGCTTGCGCCC 323 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||| || |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 322 ATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 263 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || ||||||||| |||||| ||||||||| || Sbjct 262 TGTGGCTGATCATCCTCTCAAACCAGCTATGGATCGTCGGCTTGGTAGGCCATTACCCCA 203 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||| ||||||| || ||| ||| | || | || ||| Sbjct 202 CCAACTACCTAATCCAACGCGGGCCGATCCTTTGCCGATA------AA--------TCTT 157 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||| ||| | || |||||||| | |||||| | | ||| || | | | Sbjct 156 TCCCCCGAAGGGCACATACGGTATTACTCCCAGTTTCCCGAGGCTATTCCGTAGCAAAGG 97 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||| |||| | || |||||||||||||||||||| Sbjct 96 GCACGTTCCCACGCGTTACTCACCCGTCCGCCGCT 62 >seq36788 Length=1761 Score = 136 bits (150), Expect = 8e-30 Identities = 91/99 (92%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||| | ||| |||||||||| ||||||||||||||| ||||| Sbjct 1665 CTTTACAACCCTAAGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 1722 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 99 ||||||||||||||||||||||||||||||||||||||| Sbjct 1723 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071455327520