Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq21152 372 1e-100 seq42319 356 8e-96 seq25966 351 4e-94 seq35950 349 1e-93 seq2809 329 1e-87 seq22555 327 4e-87 seq42172 295 2e-77 seq18145 232 2e-58 seq32048 208 3e-51 seq38752 107 7e-21 seq41881 80.6 1e-12 >seq21152 Length=2898 Score = 372 bits (412), Expect = 1e-100 Identities = 451/603 (75%), Gaps = 26/603 (4%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| ||||| |||| | ||||| |||| | |||||||| | ||| |||| ||||| Sbjct 2075 TCGACGACGGACCTTAG-CACCCGCCGTCTGTCTGCCGCGCTGT-ACTCGCCGGTATTCG 2132 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || |||||| | ||| |||||||| ||||||||||||||||| || Sbjct 2133 GAGTTTGGTTAGGTTTGGTAAGACTTTGGATCCCCCTAGCCCATCCAGTGCTCTACCCCC 2192 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || || ||| |||||| |||||||| ||||| |||||||||||||| | || Sbjct 2193 GGCGGTAATCACACGACGCACTACCTAAATAGTTTTCGCGGAGAACCAGCTATTTCCGAG 2252 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||| ||||||||||||||||| |||||||||||| | ||| |||| | ||| Sbjct 2253 TTTGGTTGGCCTTTCACCCCTAATCACAGGTCATCCGATACCTTTGCAACGGTAACCGGT 2312 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 ||||||||||| || ||||| |||||||||||||||| |||||||| | || Sbjct 2313 TCGGTCCTCCAGTGCGTGTTACCGCACCTTCAACCTGCCCATGACTAGATCACCCGGTTT 2372 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 ||||||| ||||| ||| | |||||||||| |||||||||||||| || |||| || Sbjct 2373 CGGGTCTACTCCGTGCAACT-AAGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACC 2431 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 ||| |||| || || |||| | || |||| | | |||| | | ||||| ||||| Sbjct 2432 TATCGGCTTAAGCTTGCTGCACAGAG-TAAGTCGCTGACCCATTATAC-AAAGGTACGCC 2489 Query 420 GTCA-CCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGG 478 || | ||| | ||| ||||||| | |||||||| ||||||||| Sbjct 2490 GTTAGCCTTG--------CGGC-------CTCCGACTGTTTGTAGGCGTTCGGTTTCAGG 2534 Query 479 TACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 | |||||||||||||| | | ||||| |||||||||||||||||||||||||||| | | Sbjct 2535 T-CTATTTCACTCCCCTTGTC-GGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCAC 2592 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATT 596 |||||||||| ||||||| |||||||| ||||| |||| || |||| || ||| Sbjct 2593 TATCGGTCACTGAGGAGTACTTAGGCTTGGAGGGTGATCCCCCCGTGTTCAGACAGGATT 2652 Query 597 TCA 599 ||| Sbjct 2653 TCA 2655 >seq42319 Length=3671 Score = 356 bits (394), Expect = 8e-96 Identities = 419/555 (75%), Gaps = 24/555 (4%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACC-ATCCAGTGC 110 ||| |||||||||||| || || ||||| ||||||||||| ||| || |||||| Sbjct 3004 CGGTATTCGGAGTTTGCTTAGGCTCAGTAAGGCTGTGGGCCCCCATCACCCATGCAGTGC 2945 Query 111 TCTACCTCCGGGAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| ||| || | || ||| || |||||||| ||||| |||||||||| Sbjct 2944 TCTACCCCCGC--AGGTATTCGTCCGAGGCGCTACCTAAATAGCTTTCGCGGAGAACCAG 2887 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 ||||| | | ||||||||||||||||||||||| ||||| ||||||| | ||||||| Sbjct 2886 CTATCTCCAGGTTTGATTGGCCTTTCACCCCTAGCCACACGTCATCCAGACCCTTTTCAA 2827 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288 | || ||||||| |||||| ||| |||||| ||||| ||||| ||||| |||| Sbjct 2826 CGGGTGTTGGTTCGGACCTCCAGTTGGTGTTACCCAACCTTCATCCTGCACATGGCTAGA 2767 Query 289 TCACTTCGCTTCGGGTCTTGATC-GTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 |||| | | ||||||||| |||| || |||||| |||||| || ||||||||||||| Sbjct 2766 TCACCTGGTTTCGGGTCT-GATCCGTCGAACTCATGCGCCCTTTTAAGACTCGCTTTCGC 2708 Query 348 TACGGCTACCCCACACGGGTTAACCT--CGCGACACAACGCAAACTCGCAGGCTCATTCT 405 | || |||| || |||| |||| || | ||||| | | || ||| | | |||| | Sbjct 2707 TGCGCCTACACCTAACGGCTTAAGCTTGCTCGACAGA---CCAAGTCGTTGACCCATTAT 2651 Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC 465 ||||||| ||||||||| || || ||||| | ||||||| | |||||||| Sbjct 2650 ACAAAAGGTACGCCGTCA---GG--GCT-CAAGGCCC-----CTCCGACTGCTTGTAGGC 2602 Query 466 ACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACG 524 ||||||||||||| ||||||||||| | ||||| |||||||||||||||||||| Sbjct 2601 GTCCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCTCACG 2542 Query 525 GTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGAT 584 ||||| || |||||||||||| |||||||| |||| ||| |||||||||| | | | Sbjct 2541 GTACTGGTTCGCTATCGGTCAGTAAGGAGTACTTAGCCTTCGGGGGTGGTCCCCCGATCT 2482 Query 585 TCACACGAAATTTCA 599 ||| || |||||| Sbjct 2481 TCAGACAGGATTTCA 2467 >seq25966 Length=3938 Score = 351 bits (388), Expect = 4e-94 Identities = 421/562 (75%), Gaps = 20/562 (4%) Strand=Plus/Minus Query 40 GCTCTCACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAGCTTGTGGGCCCCCTAG 98 |||| ||||| |||| |||| ||||||| || ||| | || | | |||||||| Sbjct 3238 GCTCGCACTTTCCGGTATTCAGAGTTTGCCATGGTTTGGTAAATCGCAATGACCCCCTAG 3179 Query 99 ACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCG 157 |||| ||||||| |||| |||| ||| | || || || |||||||| ||||| Sbjct 3178 -CCATAACAGTGCTTTACCCCCGG-AAGTGATACATGAGGCACTACCTAAATAGTTTTCG 3121 Query 158 GGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCC 217 |||||||||||||||| | |||||| || ||||||||||||||||||||| |||||||| Sbjct 3120 GGGAGAACCAGCTATCTCCGAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCC 3061 Query 218 TCAGTTTT-CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTG 276 | |||||| |||| ||||||||||| |||||| || ||||| ||||| |||| Sbjct 3060 T-AGTTTTGCAACACTAGTGGGTTCGGACCTCCAGTGCGTGTTACCGCACCTTCATCCTG 3002 Query 277 CCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGA 336 |||||||||||||||| | ||||||||| | | || ||| | |||||||||||||| Sbjct 3001 GCCATGGATAGATCACTCGGTTTCGGGTCTACACCCAGCGACTGAGACGCCCTATTCGGA 2942 Query 337 CTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAG 396 |||| |||| ||||| || ||| | | |||||| || || || || | || |||| | Sbjct 2941 CTCGGTTTCCCTACGCCTCCCCTATTC-GGTTAAGCTTGCCACTGAATG-TAAGTCGCTG 2884 Query 397 GCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGG 456 | |||| | ||||||| |||| |||||| | | || || ||||| || | Sbjct 2883 ACCCATTATACAAAAGGTACGCAGTCACCCGTTTCC----AG--------GCTCCCACTG 2836 Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTT 516 ||||| ||| |||||||||| |||||||||||||| || ||||| |||||| ||||| Sbjct 2835 TTTGTATGCATCCGGTTTCAGGTTCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTT 2776 Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 ||||||||||||| || | ||||||||| | |||||||||| ||| || |||||| Sbjct 2775 CCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCC 2716 Query 577 CGCCAGATTCACACGAAATTTC 598 | ||| |||| || ||||| Sbjct 2715 CCCCATCTTCAGACAGGATTTC 2694 >seq35950 Length=2181 Score = 349 bits (386), Expect = 1e-93 Identities = 414/553 (75%), Gaps = 20/553 (4%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGCT 111 || ||||||||||||||| || |||||| | || |||||||| |||||||||||| Sbjct 1484 GGTATTCGGAGTTTGGTTAGGTTTGGTAAGATGGTAAATCCCCCTAGCCCATCCAGTGCT 1543 Query 112 CTACCTCCGGGAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGC 169 ||||| || | || | || ||||||| |||||||| |||||| ||||||||||| Sbjct 1544 CTACCCCCTG--AGGTATTCGTCCGACGCTCTACCTAAATAGATTTCGCGGAGAACCAGC 1601 Query 170 TATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229 ||| | |||||||||||||||||||||||| ||||| ||||||| | |||||||| Sbjct 1602 TATTTCCGAGTTTGATTGGCCTTTCACCCCTAGCCACAAGTCATCCGCGTCTTTTTCAAC 1661 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 | || ||||||| ||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 1662 AGACGTCGGTTCGGCCCTTCAGTGCGTGTTACCGCACCTTCAGCCTGCTCATGGCTAGAT 1721 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 ||| | ||||||||| || ||| | ||||||| ||| |||||||||||||| Sbjct 1722 CACCCGGTTTCGGGTCTAATCCGACGAACTGA-ACGCCCTGTTCAGACTCGCTTTCGCTG 1780 Query 350 CGGCTACCCCACACGGGTTAACCT--CGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 || |||| || ||| |||| || | || || | || |||| | | |||| | | Sbjct 1781 CGCCTACACCTACCGGCTTAAGCTTGCTCGTCAGA---TTAAGTCGCTGACCCATTATAC 1837 Query 408 AAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCAC 467 |||||| |||||||||| || || | ||| || ||||| | ||||||||| Sbjct 1838 AAAAGGTACGCCGTCAC------CCAGAACGAATCTTGGGCCCCGACTGTTTGTAGGCAT 1891 Query 468 ATGGTTTCAGGTACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTCCCTCACGG 525 ||||||||| ||| ||||||||||| | | ||||| ||||||||||||||||||||| Sbjct 1892 CCGGTTTCAGGAACTGTTTCACTCCCCTTGTC-GGGGTGCTTTTCACCTTTCCCTCACGG 1950 Query 526 TACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATT 585 ||||||| ||||||||||| | ||||||| |||||||| |||||||||| ||| || Sbjct 1951 TACTTGTTCGCTATCGGTCGTCGAGGAGTACTTAGGCTTGGAGGGTGGTCCCCCCATGTT 2010 Query 586 CACACGAAATTTC 598 || || ||||| Sbjct 2011 CAGACAGGATTTC 2023 >seq2809 Length=5502 Score = 329 bits (364), Expect = 1e-87 Identities = 411/555 (74%), Gaps = 10/555 (2%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGTGC 110 ||| ||||||||||||||| || |||| | | ||||||||| ||| | ||||||||| Sbjct 2063 CGGTATTCGGAGTTTGGTTAGGTTTGGTAGGGCTTTGGGCCCCCCTAGCCGATCCAGTGC 2004 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| ||| || || ||||| |||||||| |||||| |||||||||||| Sbjct 2003 TCTACCCCCGATGGTAATCAGATAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 1944 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | |||||||||| |||||| ||||| ||||| |||||||||| ||| |||| Sbjct 1943 ATTTCCGAGTTTGATTGATCTTTCATCCCTAGCCACAAGTCATCCCCTACTTTTGCAACA 1884 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 ||||||||||| ||||| ||| || ||| ||||| ||||| ||||| |||||| Sbjct 1883 GGAGTGGGTTCGGCCCTCCGTTAGGTTTTCCCCCAACTTCAGCCTGCTCATGGCTAGATC 1824 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 || | ||||||||| | | ||| | |||||||||| |||||||||||||||| Sbjct 1823 ACACGGTTTCGGGTCTAATACATCTAACTTGT-CGCCCTATTCAGACTCGCTTTCGCTAC 1765 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 |||||| || ||| ||||||| || | | || | || |||| | | |||| | ||| Sbjct 1764 GGCTACACCTATCGGCTTAACCTTGCTAGA-TACACTAAGTCGCTGACCCATTATACAAG 1706 Query 411 AGGCACGCCGTCACCTGG--TACCTA---AAAGGCACTTCAGCTCCGACGGATTGTAGGC 465 ||| |||||||||| || || ||| || | | |||||||| | ||||| || Sbjct 1705 AGGTACGCCGTCACACGGCTTATCTATTGCTAGATA-ATGTGCTCCGACTGCTTGTAAGC 1647 Query 466 ACATGGTTTCAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACG 524 | ||||||||||| |||||||||||||| ||||| |||||| ||||||| |||| Sbjct 1646 ATTTGGTTTCAGGTTCTATTTCACTCCCCTTATCGGGGTTCTTTTCGCCTTTCCTTCACA 1587 Query 525 GTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGAT 584 ||||| || | ||||||||| || | |||| |||||||| | |||||| | ||| | Sbjct 1586 GTACTGGTTCACTATCGGTCGTCAGGTAGTACTTAGGCTTGGAGAGTGGTCTCCCCATGT 1527 Query 585 TCACACGAAATTTCA 599 ||| || | ||||| Sbjct 1526 TCAGACAAGGTTTCA 1512 >seq22555 Length=2992 Score = 327 bits (362), Expect = 4e-87 Identities = 379/503 (75%), Gaps = 21/503 (4%) Strand=Plus/Plus Query 91 CCCCCTAGACCATCCAGTGCTCTACCTCCG--GGAAGAAACACGCGACGCTGCACCTAAA 148 |||||||| | |||||||||||| || || | | || | |||| ||||||| Sbjct 1747 CCCCCTAGCCTTAACAGTGCTCTACCCCCAACGGTATTCGCTCGAGGCGCT--ACCTAAA 1804 Query 149 TGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAG 208 | ||||| |||||||||| |||| | | |||||| |||||||||||||||||||| Sbjct 1805 TAGCTTTCGAGGAGAACCAGATATCTCCCGGCTTGATTAGCCTTTCACCCCTATCCACAC 1864 Query 209 GTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCT 268 |||||||||| | |||||||| | |||||||||||||||||| || |||||| || Sbjct 1865 GTCATCCCCTAATTTTTCAACATTAGTGGGTTCGGTCCTCCAGTTAGTGTTACCCAACCT 1924 Query 269 TCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCC 328 ||||||||| |||||||||||| | | ||||||||| | ||| ||| || ||||| Sbjct 1925 TCAACCTGCACATGGATAGATCGCCGGGTTTCGGGTCTACGCCTTGCAACT-ATTCGCCC 1983 Query 329 TATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAA 388 || |||||| |||| |||||||| ||| | | |||||||||||| |||||| | Sbjct 1984 AGTTAAGACTCGGTTTCCCTACGGCTCCCCTATTC-GGTTAACCTCGC--TACAACG-TA 2039 Query 389 ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGC 448 | |||| | | |||| | ||||||| |||| ||||| || | |||| || Sbjct 2040 AGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC------CCCACAAGG-----AGGC 2088 Query 449 TCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC-CGCCAGGGGTACTT 507 ||| || | ||||| | ||| |||||||||| ||||||||||||| || |||| ||| Sbjct 2089 TCCCACTGCTTGTACGTACACGGTTTCAGGTTCTATTTCACTCCCTTAACAAGGGTTCTT 2148 Query 508 TTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAAC 567 ||| |||||||||||||||||| || |||||||||||| |||||||||||| ||| Sbjct 2149 TTCGCCTTTCCCTCACGGTACTGGTTCGCTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 2208 Query 568 GGGTGGTCCCGCCAGATTCACAC 590 || ||||||| ||| |||| || Sbjct 2209 GGATGGTCCCCCCATGTTCAAAC 2231 >seq42172 Length=611 Score = 295 bits (326), Expect = 2e-77 Identities = 348/467 (75%), Gaps = 17/467 (4%) Strand=Plus/Plus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||||||| |||||||| |||||| |||||||||||||| || ||||||||||||||| Sbjct 3 CGACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTATTACCGAGTTTGATTGGCCTT 62 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACG 252 ||||||||| ||||| ||||||| | ||| |||| | ||||||| |||||| Sbjct 63 TCACCCCTAGCCACAAGTCATCCGAGAATTTTGCAACATTCAACGGTTCGGCCCTCCAGC 122 Query 253 CGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCG 312 || ||||| ||||| ||||| ||||| |||||||| | |||||||| | ||| Sbjct 123 AAGTGTTACCTTGCCTTCAGCCTGCTCATGGCTAGATCACCCGGTTTCGGGTC-TAATCC 181 Query 313 TGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACC 372 | | |||||||||||||||||||||||||| || |||| || ||| |||| | Sbjct 182 AACGAACTTGACGCCCTATTCGGACTCGCTTTCGCTGCGCCTACACCTATCGGCTTAAGC 241 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | | || |||| | | |||| | ||||||| |||||||||| || Sbjct 242 TTGC-TCGTTAAATTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCAC------CC 294 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 | || |||||||| | ||||||||| ||||||||| ||| ||||||||| Sbjct 295 T----TGC----GGGCTCCGACTGTTTGTAGGCATCCGGTTTCAGGAACTGTTTCACTCC 346 Query 493 CCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGG 551 || | ||||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct 347 CCTCGTCGGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGTCGAGG 406 Query 552 AGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 |||| |||||||| |||||||||| ||| |||| || ||||| Sbjct 407 AGTACTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTC 453 >seq18145 Length=1127 Score = 232 bits (256), Expect = 2e-58 Identities = 286/378 (76%), Gaps = 10/378 (3%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC-CAGT 108 ||| |||||||||||| || ||| |||||| | | |||||||| |||| |||| Sbjct 377 CGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCGCCATGACCCCCTAG-CCATAACAGT 320 Query 109 GCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||||| ||| | || || || || |||||||| |||||| ||||||||| Sbjct 319 GCTCTACCCCCGATG-GTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAG 261 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CA 227 |||| | ||||||| || ||||||||||||||||||||| |||||| || |||||| || Sbjct 260 CTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCA 202 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || ||| ||||||| |||||| | |||| ||||| |||| |||||||||| Sbjct 201 ACACTAGTCGGTTCGGACCTCCAGCACCTGTTACGGTGCCTTCATCCTGGCCATGGATAG 142 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 ||||||| | ||||||||| | | || ||| | ||||||||||||||||| |||| | Sbjct 141 ATCACTTGGTTTCGGGTCTACACCCAGCGACTGAATCGCCCTATTCGGACTCGGTTTCCC 82 Query 348 TACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 | ||||||||| | | |||||||||||| || || | || |||| | | |||| | | Sbjct 81 TGCGGCTACCCTATTC-GGTTAACCTCGCCACTGAATG-TAAGTCGCTGACCCATTATAC 24 Query 408 AAAAGGCACGCCGTCACC 425 |||||| |||| |||||| Sbjct 23 AAAAGGTACGCAGTCACC 6 >seq32048 Length=424 Score = 208 bits (230), Expect = 3e-51 Identities = 228/297 (77%), Gaps = 11/297 (4%) Strand=Plus/Plus Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194 |||||| |||||| |||||||||||| || |||||| | ||||||||||||||||| Sbjct 118 ACGCTGTTCCTAAAAACATTTCGGGGAGTACGAGCTATTTCTCAGTTTGATTGGCCTTTC 177 Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCG 254 ||||||| || ||| |||||| | |||||||| | |||||||||||||||| Sbjct 178 ACCCCTACCCTCAGTTCATCCGAAAACTTTTCAACGTTTACCGGTTCGGTCCTCCACGAT 237 Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTG 314 || ||||| ||||||||||||| ||| || |||||||| | |||| |||| || | Sbjct 238 GTGTTACCAGCGCTTCAACCTGACCAAGGGTAGATCACAAAGTTTCGCGTCT---ACG-G 293 Query 315 CCACTCA-TA--CGCCCTATTCGGACTCGCTTTCGCTACGGCTAC---CCCACACGGGTT 368 ||||| | || |||||||||| |||||||||||||| ||||| | | || || Sbjct 294 CCACTGACTAATCGCCCTATTCAGACTCGCTTTCGCTTCGGCTCCTGTTCTTCAAACATT 353 Query 369 AACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACC 425 ||||| || | ||| |||||| ||||||||| | ||||||||||||||||||| Sbjct 354 AACCTTGCCA-GTAACCGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACC 409 >seq38752 Length=1498 Score = 107 bits (118), Expect = 7e-21 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 486 TCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545 ||||||||| || ||||| |||||| ||||||||||||||||||||| | ||||||||| Sbjct 1 TCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTTGTTCACTATCGGTCG 60 Query 546 CCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | |||||||||| ||| || ||||||| ||| ||||| || |||||| Sbjct 61 ATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCA 114 >seq41881 Length=496 Score = 80.6 bits (88), Expect = 1e-12 Identities = 66/79 (84%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 46 ACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGC-CCCCTAGACCATC 104 |||||| || ||||||||||||||| || ||||| | |||||| ||||||| ||||| Sbjct 412 ACTTCCAGGTATTCGGAGTTTGGTTAGGTTTGGTAATCCTGTGGGGACCCCTAGCCCATC 471 Query 105 CAGTGCTCTACCTCCGGGA 123 |||||||||||| || ||| Sbjct 472 CAGTGCTCTACCCCCTGGA 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816676495616