Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq5849 241 3e-61 seq33506 239 9e-61 seq5840 230 5e-58 seq5841 203 6e-50 seq42319 199 8e-49 seq47862 194 3e-47 seq25966 185 2e-44 seq5550 181 2e-43 seq36788 82.4 2e-13 >seq5849 Length=3646 Score = 241 bits (266), Expect = 3e-61 Identities = 236/306 (77%), Gaps = 19/306 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 |||||||||| |||||| || | |||||||| |||||||||||||||||||||||||||| Sbjct 2390 GGCGTCGCTGGATCAGGCTTGCGCCCATTGTCCAATATCCCCCACTGCTGCCTCCCGTAG 2331 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| || |||| ||| Sbjct 2330 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAAGAT 2271 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| ||| ||| ||||||||||| |||||| | | || |||| || Sbjct 2270 CGTTGCCTTGGTAAGCTTTTACCTCACCAACTAGCTAATCTTGCATGGGCTCATCCTTAG 2211 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCT-GACATTATGCGGTATTAGCGTT 239 || ||||||||||| ||||| | ||||||||||||||||| | Sbjct 2210 GCAATAAATCTTTG-----------------ACCTCTCGGCATTATGCGGTATTAGCAGT 2168 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||||||||| ||||| || | | || ||||| || | || || ||||||||||||| | Sbjct 2167 CGTTTCCAACTGTTATCCCCCACCTAAGGGCAGATT-CCCATGTATTACTCACCCGTCTG 2109 Query 300 CCACTA 305 |||||| Sbjct 2108 CCACTA 2103 >seq33506 Length=1068 Score = 239 bits (264), Expect = 9e-61 Identities = 235/304 (77%), Gaps = 17/304 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 916 GGCATGGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 857 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || |||| |||| Sbjct 856 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTAACGAT 797 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||||| ||||||| |||| | ||||||| Sbjct 796 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCGTACGCGGACTCATCTTTTG 737 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||||||||||| || || | | | || |||||||||| Sbjct 736 GCGATAAATCTTT------------ATCCCGT----AGGAACCATCCGGTATTAGCTCCA 693 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| |||||||| | |||||||| | | |||| ||||||||||||| ||| Sbjct 692 GTTTCCCGGAGTTATTCCGAACCAAAAGGCAGATATC-CACGCGTTACTCACCCGTGCGC 634 Query 301 CACT 304 |||| Sbjct 633 CACT 630 >seq5840 Length=1738 Score = 230 bits (254), Expect = 5e-58 Identities = 233/304 (77%), Gaps = 17/304 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| ||| || ||||||||||||||||||||| Sbjct 1427 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 1368 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 1367 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 1308 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||||||| |||| | ||||||||| ||||||| |||| | ||||||| Sbjct 1307 CGTCGCCTTGGTGGGCCATTACCCCACCAACTAGCTAATCGTACGCGGACTCATCTTTTG 1248 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||||||||||| || || | | | || |||||||||| Sbjct 1247 GCGATAAATCTTT------------ATCCCGT----AGGAACCATCCGGTATTAGCTCCA 1204 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| |||||||| | |||||||| | | |||| ||||||||||||| ||| Sbjct 1203 GTTTCCCGGAGTTATTCCGAACCAAAAGGCAGATATC-CACGCGTTACTCACCCGTGCGC 1145 Query 301 CACT 304 |||| Sbjct 1144 CACT 1141 >seq5841 Length=1512 Score = 203 bits (224), Expect = 6e-50 Identities = 235/313 (75%), Gaps = 19/313 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 998 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 939 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||| | ||| ||||||| || |||| ||| Sbjct 938 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAAACCAGCTAGGGAT 879 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||||| |||||| || || |||| Sbjct 878 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACGTAGGCACATC----- 824 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCA--------TCCTCTGACATTATGCGGTAT 232 |||| | | ||| | ||| | | ||| ||| ||||||||||||||| Sbjct 823 -CGAT-AGCATGTGGCC--CGAA-GGTCCCACACTTTGGTCCGTAGACATTATGCGGTAT 769 Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292 || | |||||||||| | ||| || |||| || || || || ||| |||||||| Sbjct 768 TAACAGTCGTTTCCAACTGGTATCCCCCTCTATCGGGTAGCTTCCT-ACGCATTACTCAC 710 Query 293 CCGTCCGCCACTA 305 ||||||||| ||| Sbjct 709 CCGTCCGCCGCTA 697 >seq42319 Length=3671 Score = 199 bits (220), Expect = 8e-49 Identities = 160/193 (83%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| || | |||||||| || || ||||||||||||||||||||| Sbjct 348 GGCATGGCTAGATCAGGCTTGCGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAG 289 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 288 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATGGAT 229 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 |||||||||||| ||| |||| | |||||||||||||||| |||| ||| ||| || Sbjct 228 CGTCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCCAACGCGGGCCGATCCTTTG 169 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 168 CCGATAAATCTTT 156 >seq47862 Length=579 Score = 194 bits (214), Expect = 3e-47 Identities = 139/160 (87%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| ||| || ||||||||||||||||||||| Sbjct 390 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 331 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 330 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 271 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||| |||||||||||| ||| | |||||||||||||||| Sbjct 270 CGTTGGCTTGGTGGGCCTTTACCCCACCAACTACCTAATC 231 >seq25966 Length=3938 Score = 185 bits (204), Expect = 2e-44 Identities = 137/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| ||| || ||||||||||||||||||||| Sbjct 592 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 533 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 532 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCCGCTACTGAT 473 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| || |||| || ||| |||||| |||| |||||| Sbjct 472 CGTCGCCTAGGTGAGCCTTTACCTCACCTACTAGCTAATC 433 >seq5550 Length=2568 Score = 181 bits (200), Expect = 2e-43 Identities = 136/160 (85%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| || | ||||||| ||| || ||||||||||||||||||||| Sbjct 2179 GGCATGGCTGGATCAGACTTGCGTCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 2238 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 2239 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 2298 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||| |||||||||||| ||| | |||||||||||||||| Sbjct 2299 CGTTGGCTTGGTGGGCCTTTACCCCACCAACTACCTAATC 2338 >seq36788 Length=1761 Score = 82.4 bits (90), Expect = 2e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| ||||||||||||||||||||| Sbjct 1697 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 1756 Query 61 GAGTC 65 ||||| Sbjct 1757 GAGTC 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997892722944