Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq6400 147 5e-33 >seq6400 Length=1097 Score = 147 bits (162), Expect = 5e-33 Identities = 176/235 (75%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 85 CGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATTGCCGGCGGGCGCC 144 |||| ||||||||||| |||||||||| |||| |||||||| ||||||| ||| | Sbjct 1068 CGGTCCGCCTGCAGGAGATGTTCGGCCTCACGGAGACACCGCGTATTGCCGACGG---CA 1012 Query 145 AGGTGG---TCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGACCCAGG 201 ||||| ||| | |||||||| || ||| ||||| |||||||||||||||| | | Sbjct 1011 AGGTGCCGCTCACCATCCACCTGCTCTCGCCGGCGCGCCGGCCGGTGCAGGTGACGCGCG 952 Query 202 ATCTGGCGAACTTCTGGCGCAGTAC---CTACGCCGAGGTGAAGAAGGATCTGAAGGGGC 258 |||| |||| ||||||| || ||| |||| | |||||| || |||||||| | Sbjct 951 ATCTCGCGAGCTTCTGG-GC--TACCGGCTACAAAGCCGTGAAGTCCGAACTGAAGGGCC 895 Query 259 GGTATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGCGCG 313 | |||||| || || ||||| || |||||| |||| || || ||||||| || Sbjct 894 GCTATCCGCGCCACTACTGGCCCGACGATCCGCTGGTCGCTGAGCCGACGGCCCG 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033074838176