Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq20757 203 8e-50 >seq20757 Length=1150 Score = 203 bits (224), Expect = 8e-50 Identities = 289/404 (72%), Gaps = 11/404 (3%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| || |||| |||||||||||| | |||||| |||| ||| || |||||||| | Sbjct 1105 CGATAGTGAGCAGCTCGCCGCCCACTTCGGTCCAGGCCAAGCCCGTCACCTGACCAATGC 1046 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | | | ||||||||||| || ||| ||||||||| ||| | | ||||||| Sbjct 1045 GGTTTTCTTCTTCGGCCAGGCCAAAGTCGAAACGGCGCACGCCCAGGTATTTTTCCAGGG 986 Query 121 AGTCGG------CCGTGACCTT---CACCGAGAAGCGTTT-TTCCAGCGCATGTTCCTTG 170 | | ||||| ||| |||| | || || || | || ||| | | Sbjct 985 TCTTGCTGCTGACCGTGGTCTTGGTCACCTTGTCGCTCTTCTTGCTGCTG-TGTGCAGTC 927 Query 171 ACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGG 230 ||| |||||||||||||||| ||||||| ||| ||||||| |||||| || ||||| ||| Sbjct 926 ACCACCTTGCGGCAGATCTTGGCGATCTCGCGATCCAGGCTACGCACGCCCGCTTCACGG 867 Query 231 GTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTC 290 ||||||||||| ||||||||||| || | | ||| | | | | |||||| | | | Sbjct 866 GTGTAGTAGCGCACGATGTCGCGAATGGCCGCCTCTTGCACTACCAGCTCGCCTTCCACC 807 Query 291 AGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCG 350 | || ||| | |||||||||||| ||||| || |||||||||||| ||| ||| Sbjct 806 ACACCGTTGTTCTTCATCTGCTTGGGCAGCAGGTAGGTGGTGGCGATGTTGACCTTTTCG 747 Query 351 TCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 || |||||||| || | ||| || || | ||||| |||||||| Sbjct 746 TCCTCGGTGTAGCCAGCCAGACGGATGATCTCCATGCGGTCCAG 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157811428544