Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq12840 114 3e-23 >seq12840 Length=715 Score = 114 bits (126), Expect = 3e-23 Identities = 191/274 (70%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 ||||||| | || | ||||||||||||| ||||||||| ||||||| || |||| Sbjct 432 CGATCAGCCAGACCTTGCGGGCACCGGCGCTCTCGGCCGATTCCTGGATGGCGCGGCGCT 373 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | || |||||| | | || ||||||| || | |||| ||||| ||| | Sbjct 372 CGACGGCGGTGGAGCCGGAGGGCACGCAGACCACGATCTGAGGA-TGGGC-----GAAGC 319 Query 121 TGTTT---TCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGT 177 || | ||| ||||| |||||||| || | |||| |||| ||| ||||| Sbjct 318 TGCGGCGATTGTGCACCTTCGAGATGAAGTGCTTGATCATCGCCTCGGCGACCTCGAAGT 259 Query 178 CGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGA 237 ||||||| |||||||| || ||| || || || || ||||| || |||||||| | Sbjct 258 CGGCGATGACGCCGTCGCGCAGCGGCCGGATCGCCTGGATGTTGCCCGGCGTACGGCCCA 199 Query 238 GCATGCGCTTGGCCTCGGTGCCGACGGCAACGAC 271 |||| ||||||||| ||||||||||| ||| Sbjct 198 GCATCATCTTGGCCTCCTCGCCGACGGCAAGGAC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1352912249376